Neoarius graeffei (lesser salmon catfish): 132895596
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Entry
132895596 CDS
T10798
Symbol
gria1b
Name
(RefSeq) glutamate receptor 1b isoform X1
KO
K05197
glutamate receptor 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04080
Neuroactive ligand-receptor interaction
ngra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132895596 (gria1b)
04082 Neuroactive ligand signaling
132895596 (gria1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132895596 (gria1b)
Ion channels [BR:
ngra04040
]
Ligand-gated channels
Glutamate (ionotropic)
132895596 (gria1b)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
132895596
NCBI-ProteinID:
XP_060792340
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Position
12:71280579..71471018
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AA seq
921 aa
AA seq
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MEPSLALLLTSLLGWCSCSSFPSNINIGGLFPTDSHEYEVFRFALSQQHELPKLVPQVDM
VDVGSSFAMTYAFCSQFSKGVYAIIGLYDKKTMNMLMSFCGALHVCFVTPSFPIDTNNQF
VIQLRPQLQDALIGLVEHYKWTKFVYMYSSDSGLTVLQKILDTAAEKSWQVTSINFDTLT
EAAFLNSIQDLDSKKEHKIILDCELERLNSILNLIAAQKKNLKNYHFILANLGFLDLNLT
DFRKGGANITGFQLMNYTDPMVSRTIDDWLVFDSKDLKSPKRRLKYTGALTYDGVSVMAT
AFQNLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVQFEGLTGHVQFNEKGHRT
NFTVNVIELVPSGPKKVGYWNENEKYVSTATYTHTLNETLDVHNRTYIVTTILESPYVML
KKNHEQLVGNDKYEGYCVELAAEIAKHVGYSYKLELVPDGKYGARDPDTKMWNGMVGELV
YGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMC
IVFAYIGVSVVLFLVSRFSPYEWHSDDSEDGGDQQSQNRTPSPEAGQSQSQGQHGQSPSQ
QDKQEKPPEHTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYT
ANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDGGSTKEFFRRSKIAVFEKMWSYMKAA
DPSVFVKTTDEGVVRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATP
KGSDLRNRVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFY
ILIGGLGLAMLVALVEFCYKSRIQSRRMKQIIDAAMLGSSLSRMGSGGENGRVVAHDFPK
AAQTLPCMGQAAGMGINTSGM
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagccaagcctggccttactgctcaccagcttgctcggttggtgctcgtgctcgagt
ttcccaagtaacattaatataggcggtttgttcccgaccgactcgcacgaatatgaggtg
ttccgattcgcgttatctcagcagcacgagctccccaaactggtgccacaagtggacatg
gtggatgtgggcagcagtttcgccatgacgtacgcattttgttcccagttctctaaagga
gtctacgccatcatcggtctgtatgacaagaagaccatgaacatgttgatgtcattctgt
ggagctctgcatgtctgcttcgtcacgcccagcttcccaatcgacaccaataatcagttt
gtcatccagctcaggccccagctccaggatgctctgatcggccttgtggaacactacaag
tggaccaaatttgtctacatgtatagctcagattcaggacttactgtgctacagaagatc
ctggacacagcagcagaaaagagctggcaggtgacatccatcaactttgatactcttaca
gaggcagccttcctgaactccatccaggacctggacagcaaaaaagagcacaagatcatt
ctggactgcgagctggagagacttaattccattcttaacctgattgcggcgcaaaaaaag
aatctgaagaactatcactttatcctggcaaacctgggctttctggacctgaatttgaca
gacttcaggaaaggtggtgccaacatcacaggcttccagctaatgaactacacagacccc
atggttagcaggactatagatgactggctggtgtttgacagcaaagacctgaagagccct
aaaaggagactcaagtacacaggagcgctcacctatgatggtgtgagtgtcatggccact
gctttccaaaacctcaggaagcagcgtattgatatttcccggcgggggaacgcaggtgaa
tgtctggccaaccccccagcaccatggggccaaggcatcgacatccagagagccctccaa
caggtgcagtttgaaggtctaacaggccacgtccagttcaacgagaaaggacatcgaaca
aactttacagtcaatgtaatagagcttgtcccgagtggacccaagaaggtgggctactgg
aacgaaaatgagaagtacgtgagcacggcgacttatacccacacactcaatgagacattg
gacgtgcacaacaggacgtacatagtcaccacaattcttgaatctccgtacgtgatgctg
aagaaaaatcacgagcagctggtagggaacgataagtatgagggatactgcgtggagttg
gccgccgagatcgccaagcatgtgggctactcttacaagctggaactcgtaccagatggc
aagtacggagcccgagaccctgataccaaaatgtggaacgggatggttggagagctggtg
tatgggaaagctgatgtagctgtggctcctctcaccatcaccctagtccgagaggaggtc
atcgacttctccaagcccttcatgagcttggggatctctatcatgatcaagaagccgacc
aaatccaagccaggcgtcttctccttcctggacccgctggcctatgagatctggatgtgt
atcgtctttgcctacatcggtgtcagcgtggtgttgttcctggtgagccgcttcagcccg
tacgagtggcacagcgacgactcggaggacggcggcgatcagcagagccagaaccggacg
ccgtctccagaagccggacagtcgcaatcgcagggtcagcatggccagagccccagccag
caagacaagcaggagaaaccacctgagcacaccaacgagttcggcatctttaacagcctg
tggttctctctgggtgccttcatgcagcagggctgcgatatttcacccagatcactgtct
ggtcgtatagttggaggcgtgtggtggttcttcaccctcatcatcatctcctcctacacg
gccaacctggcggcttttctgactgtggagaggatggtgtcgcccatagagagcgcagaa
gacctagccaagcagacggagatcgcttacggcaccttggatggaggatcaaccaaagag
ttcttcaggagatcaaagatagctgtgtttgagaagatgtggtcctacatgaaggctgca
gatccttcagtgttcgtaaagaccaccgatgagggcgttgtgagagtgcggaaatccaaa
gggaaatacgcatatctgctggagtccaccatgaacgaatacatcgaacagcgcaaacct
tgtgataccatgaaggttggtggaaacctggactccaaggggtatggggtcgccactcct
aaaggttctgacttaagaaaccgagtaaacctggcagtgttaaaactgaacgagcagggc
ctgttggacaaattgaaaaacaaatggtggtacgacaagggcgagtgcggcagcggggga
ggtgattccaaggataaaaccagcgccctgagcctcagtaatgtggccggggttttctac
atcctgattggaggattggggctggccatgctggtggctttggtcgagttctgttacaag
tccaggatccagtctcggagaatgaagcaaatcatcgacgcagcaatgttgggctccagc
ctgagccgcatgggcagcggaggagagaacggccgcgttgtggctcacgattttcccaaa
gcggcacagactctcccctgcatgggccaagcagcgggcatgggaatcaacaccagcggc
atgtag
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