Neoarius graeffei (lesser salmon catfish): 132895615
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Entry
132895615 CDS
T10798
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132895615 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132895615 (rbm22)
Spliceosome [BR:
ngra03041
]
Complex B
Other components
Prp19-related factors
132895615 (rbm22)
Complex C
132895615 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RRM_3
RRM_YTH1
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
132895615
NCBI-ProteinID:
XP_060792371
LinkDB
All DBs
Position
12:complement(73728361..73761807)
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AA seq
425 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDDMPRSDVNKEYYTQN
MEREIANSDGTRPVGALGKAPGTSDMLLKLARTTPYYKRNRPHICSFWVKGECRRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLKRASTMPRLDPPEDKSITTLYIGGLA
DSITDSELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIIHGHRLNV
KWGRSQAARGKDGEKEGVTESGIRLEPVPGLPGALPPPPVSTDDISANYFNLAPNTGPAV
MNLGIPPPPGVAMPPPPGFGPPMYPSMDPMAPPMPPPMAMRPPGQVHYPSQDPLRMGAHA
SRGGS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccacttccttaggctcgaacacgtacaatagacagaattgggaggactctgatttc
ccgattctctgtcagacatgtttgggagagaatccatacatccgaatgaccaaagaaaag
tatggcaaagagtgcaagatctgtgcccgtcccttcaccgtgttccgctggtgtcccggg
gtcaggatgcgctttaagaagacggaagtgtgtcagacttgcagtaagatgaaaaacgtt
tgtcagacctgcctgttggatctggagtacggtttacccattcaagtcagagacacaggg
ctgtccgttaaagacgacatgccaagatcggacgtgaacaaagagtactacacccagaac
atggagagagagattgcgaactcggatggcacacggccggtcggtgcacttggcaaagcc
cctgggaccagtgacatgctgttgaagctcgctcgcaccactccttactacaagaggaat
agacctcacatctgctctttctgggtgaaaggggagtgccgtcggggagaggagtgccct
tacaggcacgagaagcccactgatccggatgacccgctggctgatcagaacattaaggac
cgctactacggcattaacgaccctgtggctaataagctgttgaagcgagcctccaccatg
cctaggttagacccacctgaggacaagtccatcaccacgctctacatcggaggtctagca
gatagcattacagattcagagctcaggaaccatttctaccagttcggggagatccgtacc
atcactgtagtgcagaggcagcagtgcgccttcatccagtttgctacacgtcaggctgct
gagatggctgcggagaaatccttcaacaagctcatcattcatggccatcgcctcaatgtc
aagtggggccggtcgcaagcagcacgaggtaaagatggagaaaaggaaggtgtgactgag
agtggaatcagactggagcctgtgcctggcctccctggagcattgcccccaccacctgtc
tctactgatgatatctcggccaactatttcaacttggcacctaacaccggccctgcagtc
atgaatttaggaatccctcctcctcctggagtagccatgcctccacctccaggttttggg
cccccgatgtacccctccatggatcctatggcccctcctatgccacctccaatggctatg
agacctccaggtcaggtgcattatccttcccaggatcctttgcgtatgggtgcccatgcc
agtcgcggaggctcctag
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