Neoarius graeffei (lesser salmon catfish): 132895628
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Entry
132895628 CDS
T10798
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132895628 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132895628 (nup98)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132895628 (nup98)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132895628 (nup98)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132895628 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
132895628
NCBI-ProteinID:
XP_060792387
LinkDB
All DBs
Position
12:74625113..74714455
Genome browser
AA seq
1810 aa
AA seq
DB search
MFPKSFGTPFGGGTGGFGTSSTFGQQNTGFGATGGFGASAFGTTNNTGGLFGATQNKPGG
LFGSSSFSQPVTSSTSSGFGFGATSGTSNSLFGSTNTGGGGLFSQPGNAFGASKPASFGT
FGTSTSSGGLFGTTNTTSNPFGGASSLFGASGFTASQPGTTIKFTPPTGSDTMVKSGVTT
SINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPMAANTGSLFGTAATVAPSTATG
LFSSSGTGFSFNQAKPSFSAGTSGFGTTPGGLFGQPTQTNSLFKPFGQATTTQNTGFSFG
GTNTMGQANTSSMGLFGTPAASQAGGLFGNSANTSTASGFGTGTGLFGQPNTGFGNVGTQ
NLFGNKPAGFGTTTTSAPSFGTGTGLFGNKPTLTLGTNTNTSTFGFGANPAGGSLFGSKP
ATGTLGTGLGAGFGTGVGTGPTSLFGNNQNKIGSTLGTVGTFGPGSFNTGTSALNFGAPQ
QPVALTDPNTALQQAVLQQQLNALNYSPFGDSDLFRNPLSDPKKKEERLKPTNPAAQKAL
TTPTHYKLTPRPATRVRPKALTSSGSGKSQLFDGLDDDEPSITNGAFMPRRSIKKLVLKN
LNGSSLYNSPLNREADDLNSPSEYPQNGLSLRADAEETQDVEPEGGAEDDLQVSKFYTNP
ITKPIPHTQPSPSLQDTINELNVRRAVGAHNGLDLSSEEISLGDESVQEERDDELEAQKP
PHPAGIVLTRVGYYTIPSMEELGKMLNENGECIVENFTVGRKGYGSVFFPGEVNLTNLNL
DEIVHLRRKEIIVYPDDKDKPSAGEGLNRRAEVTLDGVWPNDKTTRTQIKSPQRLSEMNY
EERLENASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEEEDVPPAKTETKKIKMAI
PAGLQQIPLSQQQQQMAPQAQSTAVLELLSRVSELDSDMADITQESPADGVLCEEEDDGM
LEDDTRMALRAATPAEPEPVSASSQIASSLGINPHTLQIMKASLFMGDNDCDLFHEQLPP
KLWEEVSSSPRLLLGKSQARISAGGLLQSKFTSAGGLFSHLPDVPFGAIPQRLSKPVVPE
TPWPSLGTSVILPPPAPEVTLRTVGARRLGGPVPLENSVTLGKGRLLMDAALYMGRSFRV
GWGPNWTLVHCGNPLGTSVESKDQSKDIMGFGFLPTSTKKRQITESPFKVHVEQVVGTET
KETAESLVVYHQPLEIGLKHSTISTVDVCPFIQPKNGVNALHDYATWIVEVLKQAGAGDV
VLRHWQQVWTLCEALWGRLGDQDLEPEANGGYQEQHARRRSFSRWLSESAAQGIQEEVCQ
SQAQCHVDAIFSYLTGHCISEACRLAQKNGDHRLSLLLSQAVGSQFSRDLLALQLADWNR
MQTDSFIQEDRLHIFALLAGKPVWEATDCCINVCAELDWKRCLAVHLWYMLPPTASVADA
LAKYEAAFQGSEEGGKYACAPLPPYMDDVEQEPLEEMEDPECKKPLYDICFHLLKLYSDK
HYSLQQLLDPTTVTAEQLDYRLSWHLWNVLQALNYTHLSVPRQNLLHTSYAAQLESAGLW
EMAVFVLLHIPNSLLRERAVRETLNRHCALEETEESAEKEHFLTDKLLIPMQWIHEAKAT
RARRDGNKHREALHLYRAEHWNHCHRLVIQNLASDCIINDNHGYLKEFLEGLAVPERSVQ
IQDWDTSGRVYLDYICVIQTLTAIQQMDSPGGELERLHADVTSLCGRIERLPCFKAKDRL
AQSEMAKCLANILRVVLSLQQGGEGTPDPRHIPLCHLAPHIGRLPMPEDYALEELRSLTQ
SYLREYVVSH
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgttccccaaatcgtttggtactcccttcgggggaggaacgggaggattcgggacttca
tccacatttggacaacagaacacagggtttggagcaacaggtggttttggtgcttccgct
tttggaaccacaaacaacaccggtggtctctttggggcaacacagaacaaacctggcggg
ctttttggctccagctcattcagtcagccggtcacttcatcgacgagcagtggatttggg
ttcggtgccacgagcggtacctcgaacagcctctttggaagtactaatacaggaggtgga
ggccttttctctcagccaggcaatgcgttcggtgccagtaaacccgcttcttttggtacg
tttggtaccagtaccagcagcggagggttgtttgggacaaccaacaccacttcgaatccg
ttcggaggagcctcttctctgtttggtgcctcgggttttactgcttcccagcctggcacg
acaatcaaatttactccaccaacaggaagtgacacgatggtaaagagcggcgtgacgacc
agcatcaacactaagcaccagtgcatcacggccatgaaggagtacgaaaacaaatctctc
gaggagctgaggttggaggattaccaggcagggaggaagggaccctctaacccaatggca
gccaacacaggcagcctgttcgggactgcagccaccgtggctcccagcaccgcgacgggg
ctcttcagctcctcgggtaccggcttcagcttcaaccaggccaagccctcctttagtgct
ggtacgagtggctttgggacgacaccaggtggtttatttggccagccaacgcagactaat
agtctcttcaagcccttcggacaggccaccaccacccagaacacaggcttctcatttggt
ggcaccaacaccatgggccaggccaataccagcagcatgggtctgtttgggaccccggct
gcctcgcaggctggaggtctgttcggaaactcagccaacaccagcacggccagcggcttt
ggcacggggactgggctctttggacagcccaacactggctttgggaatgtgggtacacag
aatctgtttggtaacaagcctgctggttttggcaccaccaccacgagtgctccctccttc
ggtacaggcactggcctgtttggcaacaaacccacgctcactctcgggacgaacacaaac
acctccacctttgggtttggagccaatcctgctggaggcagtctgtttggaagcaaacct
gccactggtacactaggaacaggactcggagcaggttttggaactggtgtaggtacaggg
ccaacgtccctgtttggaaacaaccagaacaagataggctccactctcgggacagtggga
acgttcgggcctggtagcttcaacacaggaaccagcgcgctgaactttggagcaccacag
caacctgttgccctgacggatcccaacactgcactccagcaggcggtgctccagcagcag
ctcaacgcgctgaactattcaccttttggagattcggacctttttagaaacccgctctct
gaccccaagaagaaagaggagcggctgaagcctacaaatccggctgcccagaaagccctg
acgacccctacgcactataagctcacacctcgtcctgccacacgtgtgcgtcccaaggcc
ctcacctcatcaggttctgggaaatctcagcttttcgatggactcgacgacgatgaacct
tccatcaccaacggagcttttatgcccaggaggagcataaagaagcttgtattaaagaac
ctgaatggaagcagtctgtacaacagtccactgaacagggaggctgatgacttgaactca
ccgtcagaataccctcagaatggcctcagtctgagagcggatgcagaagaaacccaagat
gtcgagccagaaggaggcgcagaggatgatctgcaagtctccaagttctacaccaaccct
attactaagcccatcccacacacgcagcccagtccgtcgctgcaagacaccatcaacgag
ctgaacgtcaggagagccgtcggggcccacaacggcctggacctcagcagtgaggagatc
tctttgggagacgagagtgttcaggaagagcgagacgacgagctggaggcacagaaacct
cctcacccagctggcatcgttttgactcgggtgggctactacaccatcccgtccatggag
gagctagggaagatgctgaatgaaaacggcgagtgtattgtcgagaactttacagtcgga
aggaaaggctatgggtcagttttcttccctggcgaagtgaatttgacaaacttgaatctt
gatgaaatcgtgcacttgagacgaaaggagataatcgtataccctgatgacaaggataag
ccgtctgcaggagagggcctcaacagacgagcagaagtgacccttgatggtgtttggccc
aacgataaaaccacccgcactcagatcaaaagtcctcagcgtctgagcgagatgaactac
gaggaacgtctggagaacgcctcacgcaaacaaggcgctcgcttcctggagtacagacct
gagaccggctcctgggtgtttgaggtggcacacttttccaagtacggcctgcaggactct
gacgaggaagaagacgtccccccggctaaaaccgagacgaagaagattaaaatggccatc
ccggcaggactgcagcaaattccactgtcccagcagcaacagcagatggcgccacaagct
cagagtacggcggtactggagcttctgagtcgtgtgtcggagctggacagtgacatggca
gatattacccaggagtctccagcagatggagtgttgtgtgaggaggaggatgacggcatg
ctggaggatgacaccaggatggccttaagagcggcgacccctgctgagccagagcccgtc
tctgcctccagtcagatcgcctcctcgttaggaatcaacccacacactcttcagattatg
aaggcatccctgtttatgggtgacaacgactgcgacctctttcacgagcagctccctcca
aaactctgggaggaggtgtcgtcttctccccggcttttacttggtaaatcccaggctagg
atttcagcaggtggccttctgcagagcaagttcacctcggctggagggctgttttcacac
cttccagatgttccttttggagcgatccctcagaggctgagtaagccagtagtaccagaa
accccatggccctccttgggcacctccgttattttgcctcctcctgcccctgaggtcacg
ctgaggaccgtcggagcacgcagactgggcggccctgtgcctcttgagaactctgtgact
ctgggaaaaggccgtctgctgatggacgccgcgctgtacatgggccgctcgttcagggta
ggatggggccctaactggacgctagtgcattgtgggaatccactcggcacgtctgtagag
tcgaaggatcagagcaaagacatcatgggcttcggtttcttgcccacatctaccaagaag
cggcagatcactgaaagcccgtttaaagtacacgtagagcaggtggtgggcacggagacg
aaggagacggcagagagcctggttgtgtaccaccagccgctcgagatcgggctcaagcac
agcacgatcagcactgttgatgtctgccccttcatccagcccaagaacggcgtgaacgct
ctgcacgattacgccacgtggatcgtggaggtcctcaaacaggcaggagctggagatgtt
gttctgagacactggcagcaagtgtggactctgtgtgaggctctgtggggacgacttgga
gatcaggacttggagccggaggctaacggaggttatcaagagcagcatgcgagaaggcgc
agtttctcccgctggctgtctgaaagcgctgcccaaggcatccaggaggaagtgtgccag
agtcaggcacagtgccacgttgatgccatattcagctacctgaccggtcactgcatcagc
gaggcttgtagactggcccagaaaaatggcgaccatcgtctgtccctgctgctgtctcag
gctgtgggttctcagttcagccgagatcttttggctctccagttagcggactggaacaga
atgcagacggactctttcatccaggaggacagactgcacattttcgccctacttgcaggc
aaacctgtttgggaagcgacagactgctgtataaatgtttgcgctgaactggactggaag
cgctgtttggctgtgcatctgtggtacatgctgcctcccacagcctctgtagctgacgct
ctcgccaagtacgaagctgcgtttcagggttcggaagagggagggaaatacgcctgtgct
cctctccctccctatatggatgatgtagaacaggaacctttggaagagatggaggatcca
gaatgtaaaaaacctctctatgacatctgtttccatctgctcaaactttacagcgacaaa
cattacagcctgcagcagctgctggaccccacaacagtgacggcagagcagttggactac
aggctgagttggcacctatggaacgtgctccaggccctgaattacacccatctgtcagtg
ccacgccagaatctcctccacacgagctacgctgcccagctcgagagcgcaggcctctgg
gagatggccgtgtttgttctgctgcacatccccaactcactgcttcgagagcgtgctgtg
cgggagaccctgaaccggcactgcgccctggaggagactgaggagtctgcagagaaggaa
cacttcctcactgacaagctactcatccccatgcagtggattcacgaagccaaggctacc
cgggcgcgcagggacggaaacaagcaccgcgaagccctgcacctctacagggctgaacac
tggaaccactgccaccggctcgtcatccagaacttggcatcagactgcatcattaacgat
aatcatgggtatctgaaggagtttctggaaggcttggcagtgcctgagcgcagcgtgcag
atacaggactgggacacatcagggcgtgtctacctggattacatctgcgttattcagacc
ctaacagccattcagcagatggacagcccaggaggcgagctggagcggctacacgcggat
gtgacgtccctgtgtggcagaatcgaacgccttccctgtttcaaagccaaagacagactg
gcccagtcagaaatggccaaatgtctggcgaacatcctgcgtgtggtgctaagccttcag
cagggtggagagggcactccagatcctcgccacatccccctgtgccaccttgcaccccat
atcggacgcttacccatgcccgaggactacgctctggaagaacttcgcagcctcacccag
tcttacctacgcgaatacgtcgtgagtcactga
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