Neoarius graeffei (lesser salmon catfish): 132895743
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Entry
132895743 CDS
T10798
Symbol
atg4a
Name
(RefSeq) cysteine protease ATG4A
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04136
Autophagy - other
ngra04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132895743 (atg4a)
04136 Autophagy - other
132895743 (atg4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngra01002
]
132895743 (atg4a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132895743 (atg4a)
03029 Mitochondrial biogenesis [BR:
ngra03029
]
132895743 (atg4a)
Peptidases and inhibitors [BR:
ngra01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
132895743 (atg4a)
Membrane trafficking [BR:
ngra04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
132895743 (atg4a)
Mitochondrial biogenesis [BR:
ngra03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132895743 (atg4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
132895743
NCBI-ProteinID:
XP_060792557
LinkDB
All DBs
Position
12:complement(82723177..82734453)
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AA seq
423 aa
AA seq
DB search
MEAVLAKYENQISVFSEFLEDLPDTEELVWILGQSYNVKTEKSALLSDVHSRLWFTYRKK
FSPIGGTGPSSDTGWGCMLRCGQMILAHALICTHLGRMWRWVSERRQPAEYQRILHCFLD
RKDSCYSIHQMAQMGVGEGKSVGEWYGPNTVAQVLRKLTLFDDWSSLAVYVSMDNTVVIE
DIKKQCHQEVRSPQCISGGVEVPPLGESSSSSSSSSGHKLTDDPEQRYAPGHASHSQRHS
QHSLDWRPLLLLIPLRMGINNINPVYIQALKECFKMRQSCGVLGGKPNLAYYFIGFIDDE
LIYLDPHTTQSAVDLETDLGVDDQSFHCYRSPHRMKITSLDPSVALGFFCKSEEDFDSWC
NQVQQEILKKRNLRMFELVEKHPSHWPPFVPPTKPEVQTTGAEFIESTDKLFESEDEFEI
LNV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagttttagccaagtatgaaaaccagatcagtgtgttctctgaattcctagaa
gatttaccagacactgaagagctagtgtggattttaggacaatcttataatgttaaaaca
gaaaagtcagcacttctttcggatgtgcattcgaggctgtggttcacctacaggaaaaag
ttcagccctatcggagggacgggtccatcgtcagacacaggctggggctgcatgctgcgc
tgtggacagatgatcctggcacatgccctcatctgcacacatctgggaagaatgtggcgg
tgggtgagtgagagacgtcagcctgctgagtaccagcgcatcctccactgctttctggac
agaaaagatagctgctattcaattcaccagatggctcagatgggggtgggggagggtaaa
tcagtcggagagtggtacggtccaaacacagtcgcgcaggtcctcaggaaactcacactg
tttgatgattggagttcgttagcggtttacgtgtcgatggacaacactgtagtgatcgaa
gacatcaagaaacagtgtcatcaggaagtgaggtcccctcagtgtatctctggtggggtc
gaagttcctccattgggtgagtcgtcgtcgtcgtcgtcgtcatcatcaggacacaagctg
acagacgacccagagcagcgctacgccccgggccacgcctcccattcccaaaggcattcc
cagcattccctggactggaggcctctgctgctgcttatcccgctccgcatgggcatcaac
aacatcaaccccgtctacatccaggccctgaaagaatgttttaagatgcgtcagtcttgt
ggagtgctcggtggaaaacccaacctggcttattacttcattggatttatagatgatgag
ctgatttatctggaccctcacaccactcaatcagctgtggacttggaaacggacctcggg
gtggacgaccagagcttccactgctacaggagtcctcatcgcatgaagatcaccagcctg
gacccgtctgtagctctgggcttcttctgtaagagtgaagaggactttgacagctggtgt
aatcaggttcagcaggaaatcctgaagaagcgaaacctgcggatgtttgagctggtggag
aagcatccgtctcactggccaccgtttgttcctccgactaaacctgaggtccagaccaca
ggagcagagttcatcgagtccacagataaactgtttgagtccgaggacgagtttgagatc
ctgaatgtttga
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