Neoarius graeffei (lesser salmon catfish): 132896362
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Entry
132896362 CDS
T10798
Symbol
srsf6a
Name
(RefSeq) serine and arginine rich splicing factor 6a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132896362 (srsf6a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132896362 (srsf6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132896362 (srsf6a)
Spliceosome [BR:
ngra03041
]
Common components
Common spliceosomal components
SR proteins
132896362 (srsf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
132896362
NCBI-ProteinID:
XP_060793116
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All DBs
Position
13:2553415..2564402
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AA seq
376 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVMVEHARGPRRDRDGYGGGGGGGGGGGYYGGGRSGYSSRSRSGRDKYGPPVRTEYR
LIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSHSDMRRALEKLDGTDI
NGRKIRLIEDKPRRRRSYSGSRSRSRSRRHSRSRSHRSSRSRSNSRSRSRSHSRRRRSRS
RSHHKSRSRSARKSHSKSPSSKSRKSRSRTQKSHSRSRSRSGDRQSRSKSTSKVKSEHSS
RGRSKEKSTSKKSRSRSASPAENGNEERVKSTSRSPSPPVEKSGSKSPEPRSRSHSRSKS
GSRSKSRSRSRSASQD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgtttacatcggccgtctgagttaccacgtccgcgagaaggacatacagcgg
tttttcagcggctatggaaaactgctggaagtcgacctgaaaaatggttatggctttgtg
gagtttgaggacacgcgggatgcagatgacgccgtatacgagctgaatgggaaggagctg
tgtggcgagagggtgatggtggaacatgcccgaggacctcggcgtgaccgagatggatat
ggcggcggcggaggaggaggaggaggaggtggttattatggaggtggccgcagtggctac
agcagcaggagtcgatcaggccgggataaatacggccctccggtccgcaccgagtaccgg
ctcatcgtggagaacctctcgagccgctgcagctggcaggaccttaaggacttcatgcgg
caggcgggtgaggtgacgtacgccgatgcccacaaggagcgcgccaacgagggagtgatt
gagttccgctctcactcggacatgcgcagggctttggagaaactggatggaaccgacatc
aacggcagaaagatccggctgatcgaggacaaaccccgccgccgccgctcgtactccggg
agtcgctccaggtctcgcagccgccggcattcccgcagcaggagccaccggagcagccga
tcccgaagcaactccaggtctcgctcaaggtctcattcccgccggcgccgctcgcgctcc
agatcccatcacaagtcccgttccaggtcggctcgcaagtcccactccaaatctccttcc
agcaaatctcgcaaatctcgctctcgcacgcagaaatcccatagcaggtcccgctctcgc
tccggcgaccgccagtcgcgctccaaaagcacttctaaagtgaagtcggagcacagctct
cgcggccgatcgaaagagaaatccacaagtaagaaatcgcgcagccgctctgcatcaccc
gcggagaacgggaacgaggagcgagtcaaatccacctcgcgctcgccatctcccccggtc
gagaagagcggctcaaaatctccggagccgcgctcacgctctcactcacgctcgaaatct
ggctcgcgctctaaatccagatcccggtccagatccgcctcacaggactaa
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