Neoarius graeffei (lesser salmon catfish): 132896417
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Entry
132896417 CDS
T10798
Name
(RefSeq) TBC1 domain family member 8
KO
K19951
TBC1 domain family member 8/9
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132896417
Membrane trafficking [BR:
ngra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132896417
Endosome - Golgi transport
Rab GTPases and associated proteins
132896417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_6
EF_EFCAB10_C
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
132896417
NCBI-ProteinID:
XP_060793216
LinkDB
All DBs
Position
13:9839549..9903330
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AA seq
1064 aa
AA seq
DB search
MWLNPAEVSLKNALNLWITDKSNDYFLLQRRRGHGDTGGKFTGMLVGALDTMLDSNARVT
PFRILLQVPGSQSSWVIASGATAEEVQKHWKWLDQNLLPYMSVFENKQDAASFAQGKVKG
LIAEEVLVGQAALEDDPTRFREAMVRFEQRFGLPLKEKLVAHYSCCYWKGRVPRQGWIYL
STNHLAFYSFLLGKEVKLLIPWAEVTALERATFGLINDAIRVQTRQKQREFSMFLDVDEV
MTVMTQLGDMALRRLFDNGKVDPDSNITKRALEQQALCQYVLSLFGLPRSETLKEVMRCA
AWTPHARCHTAGTLYVTENYMAFSSLQEGHCTLLIPLAEVQSVEKAESTGALPNPVIISV
RSKRAFQLIEVTRRDQLVDDLNARLRVFRWESDRRRTLTSSTPYYTFCYDTDDTLHPVIL
EEALITTFQTSQSESSEHRRLWDEHFEEFGRGVHMFRTEKTRKLVAAGIPESLRGEMWLT
FSDAWSSMNSHSRSYTDLLEERTSEQTSDEIERDLRRSLPEHAAFQSETGIAALRRVLNA
YAFRNPGIGYCQSMNILASVLLLYTREEEAFWLLVTVCERMLPDYFNRRVIGAQVDRSVF
EELIRERLPHLAERVPDLSALSSLSLSWFLALFLSAVPFRSGLRILDCFFCHGIKIIFQL
GLAVLDANVDEICASTDDGQSLMILTSFLERVRDDEGLGVSSEETRPAGYTQISALITDA
NEKFGDLTVKQLERMRSRHRIQVLQAHEDTSKENTLRIVSPGVCLSQDDLSELYDLFKTE
HFINLYWGDGVCSTIPEQYQVDRAQFKSLYQLLMPWQCGSHTHTMAQRTFNLLDQDGQNH
ITFSQFAHWIDTLYCEELNEKVRLLYRLHIPPALTENEGSPSPVKAPILSSTRPLCVNLP
NGEEKSYEEQLKQMLKDLGKEKEKGLEKPLPHMKQQEFVQFCKTLCSMFHGVPGENELFQ
AIAVVTSLVLQIGEARHKGAEPRESDQTALQSDQTVSASGRGSVSEAGSDWTVSFEQILA
SLLTEQVLVTFLETPVNLGEKIALAKEKQYQQRSGLLMVQHSIS
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaatccggctgaggtgtcgctgaaaaatgcgctcaatctctggatcacggac
aaatctaacgattattttctcctgcagcgaagaaggggacatggagacaccgggggcaaa
ttcacgggtatgttggtgggagcactggataccatgttggactcaaatgcacgggtcact
ccatttcggatacttctacaagttccgggttcacagagcagctgggtcatcgctagtggg
gccacagctgaagaagttcagaaacactggaaatggctggaccagaacttgttgccgtac
atgtctgtatttgagaacaaacaggacgctgcaagctttgcacagggcaaagtcaagggc
ctaattgctgaagaagtactagttggccaggcagcactggaagatgacccaacccgtttc
cgtgaggcaatggtgcgattcgagcagcgatttggccttccactgaaagaaaaattggtg
gctcattactcctgctgctactggaaaggccgagtgcctcgtcaaggctggatctacctc
tccaccaatcacttggctttctactcctttctgctcggaaaagaagtgaagctgttgatt
ccatgggcagaagtcacggctctggagcgtgcgacctttggtcttatcaatgatgcgatt
cgagttcaaacgcgtcagaagcagcgtgaattctccatgttccttgatgtcgatgaagtg
atgaccgtgatgactcagttgggcgacatggcactgcgaagactgtttgataacggcaaa
gtggacccggattccaatattactaaacgggcactggagcagcaggccctgtgccagtat
gtgctgtcgctttttggcctcccacgttctgagacattaaaggaagtgatgcgatgtgca
gcttggacgcctcatgcccgatgtcatacagctgggactctctatgttacagaaaattac
atggccttcagcagccttcaggagggacactgcaccctccttatcccactcgctgaggtg
cagtctgtggagaaagcagagagcactggtgctctgccaaaccccgtgatcatcagtgtg
cgctcgaagcgggcattccaactgattgaagtgacgcgacgagaccagctggtggacgat
ctgaatgcacgtctccgagtgtttcgctgggagagcgaccgcagaaggactctgacttcc
tccacgccatattatacgttctgctatgacacggatgatactctccatcctgttattctc
gaggaagcactaatcaccacattccaaaccagccaatcagaatcctctgagcacaggcgt
ctgtgggatgagcactttgaggagttcggccgaggcgtgcatatgttccgcactgagaaa
acacgaaaactggtagctgcgggcatcccggagtcactgcgtggagagatgtggctaacc
ttttcagatgcatggtcctctatgaacagccattcgcgctcttatactgatttgctggag
gagaggaccagtgagcagacgagtgacgagatcgagagagacctgcggcgctcattgcct
gaacacgctgcgtttcagagtgagacaggcatcgcagcattacgccgtgtactcaacgcc
tacgccttccgcaacccaggcattggctactgccagtctatgaacattttagcatcagtg
ttgctgctctacacaagagaggaagaagcattctggctgctggtcacagtgtgtgagaga
atgctgcctgattacttcaaccgcagagtcattggtgctcaggtggaccgctctgtgttt
gaggaactgatccgtgagcgattgccgcacctggccgaacgtgttccagacctttctgct
ctctcttcgctctcgctctcttggttcctcgctctgttcctcagcgctgttccgttccgt
agtggcctgcgcatcctcgactgcttcttctgccatggcatcaaaatcattttccagctg
ggccttgctgtgcttgatgctaacgttgatgaaatttgtgctagcactgacgatggtcag
tcactaatgatactgaccagtttcctggaacgtgtccgagatgacgaggggttgggtgtg
agttctgaggagacgaggcctgcaggatacacgcagatcagtgctctcatcactgatgca
aatgagaaatttggggacctgacagtaaagcaactggaaaggatgagatcaagacacaga
atccaagtgctgcaggcccatgaggatacctctaaagagaacaccttgcggattgtctcg
cctggtgtgtgtctctctcaggatgatctgtcagaactctacgacctctttaagacggaa
catttcattaacttgtactggggagatggagtgtgttctactattcctgaacaataccaa
gtggaccgtgcccagtttaagagcctttaccaactgttgatgccttggcagtgtggatca
cacactcatacaatggcacagagaactttcaatctgttggaccaagatggacaaaaccat
atcacattcagccagtttgctcactggatcgataccctgtactgtgaagagctgaatgag
aaagtcaggcttctctatcgtctccacattccacctgccctgactgagaatgaaggcagt
ccttctcctgtgaaggctcccatcctttcctccaccagacctctctgtgtcaacctgccc
aatggagaggagaaaagctatgaagagcagctgaagcagatgttgaaggacttgggcaag
gagaaagaaaaaggcttggagaaacccctccctcatatgaaacaacaagagtttgtccag
ttttgcaagacgctgtgcagtatgttccatggtgtccctggtgaaaatgaactcttccaa
gccattgctgtggtcaccagtttagtactgcagattggtgaggcccggcacaagggagct
gaaccaagggaatcggaccaaactgcattgcaatcggaccaaacagtctctgcgtctggg
agaggaagcgtgtccgaggcaggaagtgattggacagtgagttttgagcagattttagcc
tcgctgctgactgagcaggtacttgtgaccttcctggagacaccagtaaatcttggtgag
aagattgcattggcgaaggagaagcagtatcagcagcgttcaggactgctgatggtccaa
cacagcattagctga
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integrated database retrieval system
