Neoarius graeffei (lesser salmon catfish): 132896497
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Entry
132896497 CDS
T10798
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03266
Virion - Herpesvirus
ngra04145
Phagocytosis
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
ngra04517
IgSF CAM signaling
ngra04518
Integrin signaling
ngra04810
Regulation of actin cytoskeleton
ngra04820
Cytoskeleton in muscle cells
ngra05100
Bacterial invasion of epithelial cells
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
132896497 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132896497 (itga5)
04517 IgSF CAM signaling
132896497 (itga5)
04518 Integrin signaling
132896497 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
132896497 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
132896497 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132896497 (itga5)
04810 Regulation of actin cytoskeleton
132896497 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132896497 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132896497 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132896497 (itga5)
04515 Cell adhesion molecules [BR:
ngra04515
]
132896497 (itga5)
04090 CD molecules [BR:
ngra04090
]
132896497 (itga5)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132896497 (itga5)
Cell adhesion molecules [BR:
ngra04515
]
Integrins
Integrin alpha subunits
132896497 (itga5)
CD molecules [BR:
ngra04090
]
Proteins
132896497 (itga5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Membra_charge
Motif
Other DBs
NCBI-GeneID:
132896497
NCBI-ProteinID:
XP_060793340
LinkDB
All DBs
Position
13:complement(23230144..23320315)
Genome browser
AA seq
1048 aa
AA seq
DB search
MDSRRNRATTVATLFHTGCSLFITCLVPWTVAFNLDVENPVIYTGPAGSYFGYSVDFYMA
QSIRDASILVGAPKANTSQPNITEGGSVFFCPWSHDRSDCHSIEFDQQGDMSIDNGETQV
EFKSYQWFGATVRAHEDSVLACAPLYSLRAQQDRLEAEVTGSCYLSDKNFTKFVEYAPCR
TEFRESGGQGYCQGGFSADFTKDGKVVLGGPGSYYWQGQLITAVKEEIIKAYYPGYLLTS
VAGQIQTKQKEHAVIFDDSYMGYSVTVGEFNGDDDEDFVTGIPRGELLHGQVSILNNSLE
TMKIINGEQMGSYFGSAVAATDINNDGLTDLLVGAPMFMMRDSDGRLEELGRVYVYLQMG
PLELVPHLPHLTGTQVFGRFGSSITPLGDLNQDGFNDIAISSPFGGKDEKGLVFIYNGYA
KGLREKPSQVITGQWSSAAPPALPAIFGYTMKGGKDLDHNGYPDLIVGAFGVDKAVLYRS
RPIVNTSATLIVYPTMINPEEKTCTISSGNQTTHVSCVNLSFCLSANGKHLPEDLVFNVE
VQLDQLKQKGAVRRALFLDTQQASLQRKLKVPNEAKVCHKTKIYLRDEKEFRDKLSSIFI
TLNFSLDEQAPTDRHGLQPILNYQTTELIEQKAQILLDCGEDNICVPDLKLSVDDGGRKE
VYIGDDNALTLTFNARNDGGGAYEAELYVVLPSEVDYSGIARNNESLTQLTCSYETENQT
RYLICDLGNPMKSGTNLWAGLRFTVPRLQDSQKVVQFDLQIRSKNENNSQSEVVPYRLDV
VVKAEVILQGVSLPDKVFFPPPNWKVIKNVAVEQEIGPQVQHIYALVNNGPSRISHTHLQ
LKCPMKLQSQRFMYPLEIITEGPVNCTTGNIMNPMNIKLQQSTEQPPLLHHHIEKRDAHR
GELPELTNLSCSNVECWTLQCNVGLLEKGTSAIFQVRSRMWGETFNMKKYKNFILECVAS
YTVEKMPYAILPKEIPAGSKTLTTPVVWNKPDSHYDVPLWIIILAILAGLLLLALLIYVL
YKLGFFKRTPYGTAMEKAQLKPQAASEA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggactccagaaggaaccgcgcaaccacggtggcaactttgtttcacacgggctgctcg
cttttcatcacatgccttgttccatggaccgtcgcgttcaaccttgatgtagagaacccg
gtgatatacacaggacccgcaggcagctatttcggttattctgtggacttttacatggca
cagtcaatacgagatgcaagcatcttagttggagcaccaaaagccaacaccagccagccg
aacatcacagagggaggctctgtgttcttctgcccatggagccatgaccggtctgactgc
cacagcatagagtttgaccagcagggagatatgagcatcgataatggtgaaacccaagtt
gagttcaagtcctaccagtggtttggagcaactgtacgtgcacatgaagactctgtcttg
gcttgtgcccctctctactccttgagagcccaacaggaccggcttgaggcagaggtcacc
ggctcctgctacctgtctgataaaaacttcaccaaatttgtggagtatgctccctgccgt
acagaattccgtgaaagtggtggccaaggttactgtcaaggtggattcagtgctgatttc
accaaggatgggaaggtagtacttggaggaccaggaagctattattggcaaggacagctc
atcactgctgtgaaggaggaaatcatcaaggcctactacccaggttatttacttacatca
gtggcaggccagattcagaccaagcagaaagaacatgcagtcatatttgatgacagctac
atgggctactctgttacagtaggagaatttaatggagatgatgatgaagactttgttaca
ggaattcccagaggtgaacttctgcatggccaggtgtctattcttaacaactctttggag
accatgaaaatcattaatggtgaacagatgggctcctactttggctctgctgtggctgct
acagacatcaacaatgatggacttacagacttgttggttggtgctcccatgttcatgatg
cgtgactcagatgggaggttggaggaattggggcgagtgtatgtgtatctacaaatgggt
ccactggagcttgtaccacatctacctcacctcactggcacacaagtttttggtcggttt
ggcagctctatcacacctctgggagatctcaaccaggatggctttaatgacattgctatc
agtagtccatttggtgggaaagatgaaaaaggattggtcttcatctataatggttatgct
aagggactccgtgagaagccttctcaagtgattactggtcagtggtcatcagctgcccct
cctgcacttcctgccatttttggttataccatgaaaggaggaaaagacttggatcacaat
ggctacccagatctcattgttggagcttttggagtagacaaggcagttctttacaggtct
cgcccaattgttaacacaagtgccaccttaattgtgtacccaacaatgatcaatcctgag
gagaagacctgcaccatcagcagtggaaaccaaaccacacatgtttcttgtgtcaacttg
agcttctgcctttcagccaatgggaagcaccttccagaagatctagtgtttaatgtcgaa
gtgcagctggaccagctgaagcagaagggagctgttcgcagagctttgtttttggacacc
cagcaggccagcttgcagaggaaactgaaggtgcccaatgaagccaaggtctgccacaag
accaaaatctacctgagggatgaaaaggagtttcgggataagctctcctccatctttatc
accctcaacttcagtctggatgaacaggctcccacagacagacatggcctccagccgatc
ctcaactaccagaccactgagctgattgaacagaaggcccaaatcttactggactgtggt
gaagacaacatctgtgtccctgacctgaaactttctgttgatgatggtggcaggaaggaa
gtgtacattggggatgataatgcactaaccctgacttttaatgctcggaatgatggaggc
ggcgcctatgaagctgagctctatgtcgtgcttccttcggaggtggactacagtggaatt
gcccgcaataatgagagtttgactcagctgacgtgcagctatgagacagaaaaccagaca
cgctaccttatctgtgatctaggaaatcccatgaagtctggcaccaatttgtgggcaggt
ctgcgtttcactgtgcctcggctgcaggattcacagaaggtggtacagtttgacttgcag
attcgcagtaaaaatgagaataactctcagagtgaggttgtcccctacaggctagatgtg
gtggtcaaggctgaagttattttacagggtgtgtccctaccagataaggtctttttccca
cctccaaactggaaggtgatcaagaatgttgcagtggagcaggaaattgggcctcaagta
cagcacatatatgcgttggtaaataatggtccaagccgtattagtcacacacaccttcag
ctgaaatgtcccatgaagctgcagtcccagaggtttatgtaccctttggagatcatcact
gaggggcctgtaaactgcacaacaggcaatattatgaaccctatgaacataaagcttcag
cagtccacagagcagcctcctttattgcaccaccacattgagaagcgtgacgcacacagg
ggggaactgcccgagctgacgaacctgtcctgttccaatgttgaatgctggaccttgcag
tgtaatgtgggtttattggagaaaggtaccagtgctatattccaggtgcgttcacgcatg
tggggcgagactttcaacatgaaaaagtataagaattttattctggagtgtgtagctagt
tacacagtggaaaagatgccatatgccattttgcccaaggagattccagctgggtctaaa
acgttgaccacacctgtggtctggaataaaccagacagtcattatgatgtgcctttgtgg
atcatcattctggcaatactggctgggcttttgttgctggctctgcttatctatgttctg
tataaacttggtttctttaagagaactccctatggcactgccatggaaaaagcacagctg
aaacctcaggctgcatctgaagcttga
DBGET
integrated database retrieval system
