Neoarius graeffei (lesser salmon catfish): 132896855
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Entry
132896855 CDS
T10798
Symbol
chl1a
Name
(RefSeq) cell adhesion molecule L1-like a isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132896855 (chl1a)
Cell adhesion molecules [BR:
ngra04515
]
Immunoglobulin superfamily
L1 family
132896855 (chl1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_5
Ig_6
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Zwei_Ig_N
C1-set
Ig_PDGFR_d4
Fn3_VIN3
MLANA
NDNF
Motif
Other DBs
NCBI-GeneID:
132896855
NCBI-ProteinID:
XP_060793956
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Position
13:50338876..50424809
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AA seq
1149 aa
AA seq
DB search
MRGLMGFHAGLLFIFFSIAFSLHVPTEVEQPPTITTQSEKSIVAMAFDDNFTLICEATGT
PKPVFYWTKDGLNFNPRNDLRLKNFEHSGSFVIPNNKYLAEYQGKYRCYASNKLGVAMSE
ETHFIVPMSPKFPKEIIEPAVVKEGDPVVLECNPPKGIPPRYLYWMTIGLEHILQDERVS
MGLNGNLYFSNVLAKDSRSDYSCFASFPKIRTIVQKTAMAIVVMSSNSSGETDVTISNRK
PNLLVPSGDLSQIYLVQGQDLEIECIAEGFPTPIIEWTKIGVKLPKRTNIKNHRKWLIIT
KVTEEDSGKYMCKAKNSAGEAVHFFDIIIEVPPHWVQEPIKSQVVSIGSEVHINCHASGK
PPPTITWMRNGEPLQEFSSSHIRVLHDTVILYRAQENNTAVYQCEVSNKHGTLLSNSNIM
VMNLPPLILTQNSVKYSVVCGNTVIMDCKVFSSPPADIVWRKEGLEASLVGDKFFLHKNG
SLQIHTTKVEDKGKYTCFVSNSEGNSSINAKLHIKDPTKILTPPQDININRGSMAELLCK
VQYDHSLTDELKILWQKDGEEIDTNYTEDSSRFYIDQGILQINNVSHSDKGLYTCIARTS
LDQDTASAYVTVLDVPDPPIDLTLSDLRDRSVKLHWMPTNDHNSHITEYIIEFEENRWEP
GNWRPLLRVSGYQNSVPLSLYGHINYQFSVSAVNAVGRGRPSKPSERYMTPPAAPDRNPE
NIKIEGHTPRQMDITWEPLLPIEHNGPGLEYKLSYRQMGVEESWTEKMVKRHSFIVKDTP
TFVPYEVKVQAYNNHGWAVEPSVVIGYSGEDLPGAAPEDVHVEVLNSTLLRVSWSPVQQA
QLRGHLEGYNVQWWRTQSLLTSTEVPAEKQFLIIPGNQSHTIVAGLKPFSQYHLTVNVFN
RKGSGPNSRLLVFTTPQGVPESPPVLKATNPQANSITLVWAPPLEANGFLTGYKLQYQIS
NDTLDVGEVYRVNISGQDTTQWVLHDLEAASGYKFYLSACTLVGCGPAISEGGSTVPVAY
AVGAHDKISSKSWFIGIMCAVALLTLVVLIACFVTKNKSGNYAVKDKEEMRSHLESKGMN
DETSCEYSDSDEKPLKNSRPTLVRDNKGDSSSMDSSAEYGNEDCEFNEDGSFIGEYVGYK
RRLSTDLTV
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaggggactcatgggctttcatgctgggctccttttcatcttcttttctattgccttt
agcctacatgtgcctactgaggtggagcagccaccaacaatcaccactcaatctgaaaaa
tctattgttgcaatggcatttgatgataatttcactttgatatgtgaagctacagggact
ccaaaaccagtgttttactggactaaagatggcctgaactttaatccacgtaatgactta
agactcaaaaactttgaacacagtggaagttttgttattccaaataacaaataccttgca
gaatatcagggtaaatacagatgttatgcatccaataaactaggagtagcaatgtcagag
gaaacccatttcattgtacctatgtcaccaaagtttccaaaagaaattatagagccagca
gtggttaaagagggagatccagtggttctggaatgtaacccaccaaaaggcattcctcct
cgctatctctactggatgactattggtcttgaacacattttacaagatgagcgagtgtct
atgggattgaatgggaacctgtacttttcaaacgtgctagcgaaagacagccgtagtgac
tacagctgttttgcttctttcccaaagattcgcaccatcgtccagaaaactgccatggct
attgtggtcatgtcctcaaactcgagtggtgaaacagatgtcactatttcgaatagaaaa
ccaaatcttctggtaccctctggtgatctgtctcaaatatatctggtacaaggacaggat
ctcgagattgagtgtattgcagagggattccccacaccaataatagaatggaccaagatt
ggagtgaagttgccaaaacgcactaacatcaagaatcatagaaaatggttgattataaca
aaagtcacagaggaagacagtggaaaatacatgtgcaaggcaaagaattctgctggtgaa
gcagttcatttcttcgacattataatagaagtgccaccacactgggtgcaagaaccaata
aaaagtcaagtagtgtcaattggatcagaggtacacataaactgccatgcttcaggaaag
ccaccacccacaatcacctggatgaggaatggtgaacctctccaagaattctcctcatcc
catatcagagtgctacatgacacagtaatcctttacagagcacaagaaaataacactgca
gtgtatcagtgtgaggtctccaacaaacatggcactttactcagcaattccaacatcatg
gtcatgaatcttcctcctttgatcctgacacagaattcggtaaagtacagtgttgtgtgt
gggaacactgtcatcatggactgcaaagtctttagttctccacctgctgatattgtctgg
agaaaagaaggccttgaagcttctttggtaggagataaattctttctccataaaaatggc
tccctacagattcacacaactaaggtggaagataaaggaaaatacacttgttttgtgagc
aactcagagggcaactccagcattaatgcaaaacttcatatcaaagacccaaccaaaatc
ttgacccctccacaagatataaatatcaacagagggagcatggcagagcttctgtgtaag
gtgcagtatgatcactcactcactgatgagctgaaaattctctggcagaaggatggggaa
gaaatagatactaattacactgaggattcaagcagattctacattgatcagggaatattg
cagatcaacaatgtaagccacagcgataaagggctgtacacatgtattgctagaacatct
ctcgaccaagatacagcatctgcatatgtaacagtgctcgatgtccctgaccctccaata
gacttaacgttatcagatctgagagatcgtagtgtgaagcttcattggatgcctaccaac
gatcataatagccacataacagagtacatcatcgaatttgaggagaaccgctgggagcca
ggcaattggaggccactgctgagagtatctggctaccagaactctgttcctctctcattg
tatggacacattaattaccagttcagcgtcagtgctgtcaatgctgttggcagaggtcgt
cccagtaaaccctctgagagatatatgactcctcctgctgccccagataggaatccagaa
aacataaagattgagggtcatacgccgcgtcagatggacattacttgggagcctttgttg
cctatcgaacataatggacctggcctagagtacaagcttagctacaggcagatgggtgtt
gaagaaagctggacagagaagatggtgaagaggcattcctttattgtgaaagacaccccg
acatttgttccttatgaggttaaggtccaggcctataataaccatggttgggcagtggaa
cccagtgtggtgattggatattctggtgaagacttgccaggtgcagctcctgaagatgtg
catgtagaggtgttgaactccacactgctgcgggtcagttggtcacctgtccaacaggcc
cagctcaggggccatcttgaaggctacaatgtgcagtggtggagaacacaaagcctgttg
acttctacagaagttcctgctgagaagcagtttctgatcatcccagggaatcagagtcac
actatcgtggctgggctgaagcctttttctcaataccatctcaccgtcaatgtctttaac
aggaagggcagtggtcccaacagcaggctactcgtgttcacaacaccgcagggagttcct
gaaagcccccctgttctcaaagccacaaaccctcaggcaaactccatcacactggtgtgg
gctccaccacttgaggccaatggtttcctcaccggatacaagctacagtaccagatatcc
aatgatacactggatgttggtgaagtatacagagtaaacatcagtggacaagacactaca
cagtgggttctgcatgatctagaggcagccagtggctacaagttctatctgagtgcttgt
acacttgtgggctgtggaccagctatcagtgaagggggttccactgttcctgtagcatat
gcagtaggtgcacatgacaaaatttcatctaaaagctggttcattggaatcatgtgtgct
gtggcattgctcactctggtagttctaatcgcctgctttgtgaccaagaacaaaagtgga
aactatgcagtgaaggataaagaagaaatgcgatcacatctggagtctaaaggcatgaat
gatgagacttcctgtgaatacagtgacagtgatgaaaagcctcttaagaacagtcggcct
acactagtgagagacaacaaaggagacagcagcagcatggacagctcagctgaatatggg
aatgaggactgcgagttcaatgaggacggatcttttattggtgaatatgttggctacaaa
cgaaggttatccacggatttgacagtttga
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