Neoarius graeffei (lesser salmon catfish): 132896935
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Entry
132896935 CDS
T10798
Symbol
trpc4apb
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4 associated protein b
KO
K11796
Trpc4-associated protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngra01009
]
132896935 (trpc4apb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132896935 (trpc4apb)
Protein phosphatases and associated proteins [BR:
ngra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132896935 (trpc4apb)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132896935 (trpc4apb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Motif
Other DBs
NCBI-GeneID:
132896935
NCBI-ProteinID:
XP_060794098
LinkDB
All DBs
Position
13:complement(57063635..57084479)
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AA seq
773 aa
AA seq
DB search
MAANGQQSSRTQTRRRNRSKNILHKIKYGQITGLGMTHGTQIPVGLLEERDKKARWQGIP
LLLRKLHNSSHINSDLSKSHSVVKELSSLLSMEAMSFVTEDRKTPQESVSPNTYTFDLFG
GVDLFIEILMRPTLSIQGNVPIMGDDLIKDCLSVLYNCCICTEGVTKSLAARDDFVMFLF
TLMSNKKTFLQTATLIEDIMGVRKEVIRLEDIPNLASLVQSFNQQQLANFCRILSVTISE
PDAGMDDKHTLLARNAQQKTTTSPSRAESNQVALLNIPGFIERLCKLATRKVSEASGTAA
LLQELEDWHSWLDNALVLDALMQMAIEEAEQSSTESSDEGSLSSSPLRHTLPQSMKIVHE
IMYKVEVLYVLCVLLMGRQRNQVHRMLAEFRLIPGLNNLFDKLIWRRHPSSHVLHRQNQN
CDCSPEISFKIQFLRLLQSFSDHHENKYLLLNGQELNELSAISLKANIPEVEALVNTDRN
LACDGKKGLLTRLISVMKKEPVDSSFRFWQARAVESFLRGATSYADQMFLLKRGLLEHIL
FCIIDSGCKSRDVLQSYFDLLGELMKFNIDAFKRFNKYVNTEEKFEMFLNQINSSLVDSN
MLVRCIVLSLDRFEGQTEDMKVIEVLSECRLLSYMAQVENRLSFLFRLINIINVQTLTQE
NVSCLNTSLVVLMLARWRGKLPFYLRALKEKEYAEKYPGCLLNNFHHLLRFWQHHYLNKD
KDSTCLENSSCIPFTYWKETVTVLLSSDRSSLCAIATYIDEAYRDLDRDFLEM
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaatgggcagcagtcgtctcgaactcaaacaagacggagaaatcgaagcaaa
aacatattacataagatcaaatatggacagataacaggtttggggatgacccacggcaca
cagatcccagtgggtcttcttgaggaaagagataagaaagcgaggtggcagggaatacca
ctgctgttgaggaaacttcacaacagcagccacataaacagcgatctttccaagagccac
agtgtggttaaggagctgtcgtctctgctgtccatggaggcgatgtcgtttgtgacagaa
gacagaaagacaccgcaggagtctgtgtcaccgaacacgtacacctttgacctttttgga
ggagttgatttgtttatagagattttgatgcggcccacactctcaatacaggggaatgtc
cctattatgggtgatgatctcatcaaggactgtttaagtgttctttacaactgctgtata
tgtacagagggtgttaccaaaagtcttgccgcaagggatgattttgtcatgttccttttc
acgctaatgtcaaacaaaaagactttcctacagactgccacacttatagaagacataatg
ggagtcagaaaggaggtgatccgactggaggatattcccaacttggccagtctggtgcag
agctttaaccagcaacagcttgccaacttctgccgtatcctgtctgtcaccatatcggag
ccggatgcaggcatggatgacaaacacacccttttggcccgcaacgctcaacagaagaca
accacgtcgccttcacgtgcagagagcaaccaagttgctctactaaacatcccgggtttc
attgagcgactgtgcaagctggctacaaggaaggtgtcggaagcttcaggcacagctgca
ctgctgcaggagctggaggactggcacagctggctggacaacgccctggtgttggacgct
ctcatgcagatggctatcgaggaggctgagcagagcagcacagagtcatctgatgaaggc
tcactttcatcaagtcctcttaggcatacgttgcctcagtccatgaagatagtgcatgag
atcatgtacaaagtggaggttctctacgtgctgtgtgtactgctcatgggccgacagaga
aatcaggttcataggatgctagcagagttccgattgattcctggactcaacaacttgttt
gacaagctgatatggaggagacatccatctagtcatgtcttacacagacagaaccagaat
tgtgactgcagtccagagatctcattcaagatccagttcctcaggctgctacagagcttc
agtgaccaccatgagaacaagtatcttcttctgaatgggcaggagctgaatgagctcagt
gccatctctctgaaagcaaatattcctgaagtggaggcgttggttaacacagacaggaat
ctagcatgtgatgggaagaagggcctcctgacacggctgatttcagtcatgaagaaagag
ccagtggattcttcattcaggttttggcaggctagagcagtagagagttttctaagagga
gccacatcctatgcagaccagatgttcctgctgaagagggggttgttggagcacatcctc
ttctgcatcattgacagtggctgcaaatcacgtgatgtccttcagagctattttgatctg
ctcggtgaactcatgaagttcaacattgatgctttcaagagatttaacaaatatgtgaac
acagaagaaaagtttgagatgtttctgaaccagatcaacagctccctcgtggattccaac
atgctggtacgctgcattgttctgtccctggaccgctttgaagggcagacggaggatatg
aaagtgattgaggtgctgtcggaatgccgcctgttgtcctacatggctcaagtcgagaat
agactctccttcctcttcaggctgatcaacatcatcaatgtgcagactctaactcaggag
aatgtgagctgcctgaacacaagtttggtagtgctgatgctggcacggtggcggggcaag
ctgccattctacctaagagctcttaaggagaaggagtatgctgagaaataccccggctgc
ttgctcaacaacttccaccacctgctgcgcttctggcaacatcactacctcaacaaagac
aaggacagcacctgtctggagaatagttcctgtattcctttcacctactggaaggagacg
gtaacggtgttgctgagttcagatagaagctccctctgtgccatagccacctacatagat
gaggcctacagggacctggacagagactttctggagatgtga
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