Neoarius graeffei (lesser salmon catfish): 132897075
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Entry
132897075 CDS
T10798
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04120
Ubiquitin mediated proteolysis
ngra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132897075 (ube4b)
04120 Ubiquitin mediated proteolysis
132897075 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132897075 (ube4b)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132897075 (ube4b)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
U-box type E3
132897075 (ube4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
132897075
NCBI-ProteinID:
XP_060794379
LinkDB
All DBs
Position
13:67774788..67834789
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AA seq
1185 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLSTPLTSPQRETPPGPLPGPSGASPQPLPPAP
SHSLGLNTQNVTPATSPMGASGVAYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKNMSQVDVDSGIENMEVEDSDRREKRNLAEKDSSSNPDVSEEQALQLICKILRVS
WKEQDRDVIFLPSLAVEFQQSPKDVYSDFKDLIGQILMEVLMMSTQSRDCNPFASLTATS
QPITAAKSPDRHLTLIPPSSQGNSPMMPCGGSFGASSLSSLGASGGGLAGDSGSDRFTIE
ACKETEMLNYLIERFDSVGMEERKAPKMCSQPVVSQLLSNIRSQCISHAALVLQGALTLP
RAPLQPSLLVPYMLCRNLPYGFIQELVRMTHQEEEVFKQIFVPILQGLALAVKECSFDSD
NFKYPLMALSELCEIKFGKTHPVCSLITSLPLWCPDPLSPGAGREIQRLSFLGAFFSLSV
FAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETREAALS
YMAALVNRNVKKAQMQTDDKLVSTDGFMMNFLWVLQQLSMKIKLETVDPLYIFHHKCRLN
VSLEETRLKSSLEELKSWLAELHGDPSKFTEPKFPTECFFLTLHAHHLSILPGCRRYIRR
LRAIRDLNRTVEELKNSESQWKDSPLATRHREMLKRCKTQLKKLVRSKACADAGLLDENL
LRRCLQFYSTVIQLIMRIVDPAYPNVTLPLNPEIPKSFAALPEFYIEDVAEFMLFIVQYS
PQVLYEPCTQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQPRTQRFFEMIENH
PLSVNQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIGHHGTFLEEFNS
GKQFVRYINMLINDTTFLLDESLESLKRIHEIQEEMKNKEQWDQLPREQQQSRQSQLTQD
ERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVE
NPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTI
AIEKFKLLSEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIIL
RHLLNSPTDPFNRQPLTESMLESVPELKERIQAWMREKQGGRFSQ
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctcagcgccgatgagattcggagaaggcggctggcccggttagccggagga
cagacgtctcagcctaccacccctctgagcacgccgctgacttcaccacagagagagacc
cctccaggtcctctgcctgggccctctggggcctcaccacagcctctgccaccagcacca
tctcattctctgggcctgaatacccaaaatgtcacgcctgccacttccccaatgggagct
tcgggggtggcttatcggagccagagcagtgagggagtcagctctctctccagctcacca
tccaacagccttgagacccagtctcagtccctgtcccgctcccaaagcatggatattgac
acagcatcctgcgaaaagaacatgtcccaggtggacgtggactcaggaattgagaacatg
gaagtagaggatagtgatcgcagggagaaacgcaacctggctgagaaggactcctcatct
aacccagatgtgtctgaggagcaggctctgcagctcatctgcaaaattctccgtgtctcc
tggaaggagcaagaccgtgatgtcatctttctgccctcactcgctgtagaatttcagcag
agtccaaaagatgtctattctgacttcaaagacctgattggccagatcttgatggaagtt
cttatgatgtctacccaatcacgtgactgcaaccccttcgccagcctgaccgccacatca
cagccaatcactgctgccaaatctccagaccgccacctgactctgatcccaccgtccagc
cagggaaacagtcccatgatgccctgtggaggctcatttggtgccagttctctgtctagc
ttgggtgcgtctggtggtggattggctggtgactcgggcagcgaccgctttaccattgaa
gcttgtaaggagactgagatgctgaactacctcatcgagcgttttgacagtgtgggcatg
gaggagaggaaagctcccaagatgtgcagccagccggtggtcagtcagctgctcagcaac
atacgctcccagtgtatttcccatgctgctcttgtgctgcagggggcccttaccctgccc
agggccccactgcagccctccctactggtgccctacatgctgtgccgaaaccttccgtac
ggctttatccaggagctggtgcgcatgactcaccaggaggaggaagtgtttaaacagatc
tttgtccccattctccaagggcttgcattagctgtgaaagaatgttcctttgacagcgac
aactttaaatatcctttgatggctttgtctgagctctgtgaaattaagtttggaaagacg
caccctgtgtgcagtttgatcacctctctgccgctgtggtgtccggatcctttaagccct
ggggcaggcagagagattcagaggctctcattccttggggccttcttcagtctttctgtc
ttcgcagaggatgatacgaaagtgggagacaaatacttctcaggccctgctattactatg
gagaacacgcgtgtggtcagtcagtccttgcagcactatctggagtctgctaggggtgac
ttatttaaaatcctccacaacatcttgctgaatggcgaaacgagggaggctgctctcagc
tacatggcagctctggtgaatcgtaatgtgaagaaggctcagatgcagacagatgataaa
ctagtgtccacagacggcttcatgatgaacttcctatgggtgctgcagcagctgagtatg
aagattaagctagagacggtggatcccctctacatcttccaccacaagtgtcggctgaac
gtgagcctcgaggagactcggcttaaatccagcctggaggaactgaagagttggcttgca
gagctgcatggagacccttccaagttcacggagcccaaattccctacagaatgtttcttc
ctgacacttcatgcacaccacctatccatcttgcctggatgccgccgttatattcgtaga
ttaagagccatcagagatctgaacagaaccgtagaggagctgaaaaacagcgaaagccag
tggaaagattcccccttggccactcgtcacagggagatgttgaagagatgcaaaacccag
ctgaagaaattggtacgttccaaggcttgtgctgatgccggcttactggatgagaatcta
ctgcgcagatgtctccagttctacagtacagtcattcagctcatcatgcgcatcgtagac
cctgcctacccaaacgtcaccttgcccctgaatcctgagatccctaaaagctttgctgcc
ctgcctgagttttacattgaggatgttgcagagtttatgctttttattgtgcagtattct
cctcaggttctgtatgagccatgcactcaggacattgtgacctttctggtggtgttcatc
tgtagtcagaactacatcagaaacccatacttgattgccaagctggtggaggtattgttt
gttactaacccagcagttcagcctcgcacacaacgcttctttgagatgatcgagaaccac
ccgctgtcagtcaatcagctagtccctgccctcatgaagttttatacagacgtagaacat
actggagccactagtgagttctatgacaaattcaccatccgctaccatatcagtaccatt
tttaagagcctttggcaaaacattggccatcatggcaccttccttgaggagttcaactct
gggaagcagtttgtgcgctacattaacatgttaatcaacgacacaacattcctgctggat
gagagcttggaatctctgaagcgcatccatgagatccaggaggagatgaagaacaaggag
cagtgggatcagctgcccagggagcagcagcagagtcgccagtcccagctgacccaggac
gagagagtatctcgctcctacctggctttagccacagagactgtggacatgttccacatt
ctgaccaaacaagtccagaaacctttcctacgtcctgaactgggtccacgactggctgcc
atgctgaattataatctccagcagctgtgtgggcctaagtgtcgggacctgaaggtagaa
aacccagagaaatatggttttgagcccaaaaagctgttggaccagcttactgatatctac
ctgcagctggactgtgctcgctttgctaaagccattgctgatgaccagagatcatatagc
agggaactctttgaggaagtgatttctaaaatgaggaaggcgggcatcaaatctaccatc
gccatcgagaagtttaagctgctgtcggagaaggtcgaggagatagtggcacgcaactct
cagtctgagatggactacagtgatgctccagatgagtttaaagatcctctgatggacact
cttatgactgatcctgttcaactgccttctgggaacattatggaccgatccatcatcctg
cgacaccttctaaactccccgactgaccccttcaacaggcagcctctcactgaaagcatg
ctggagtcagttccagagctgaaagaacgtattcaagcttggatgagggaaaagcaagga
ggacgcttttctcagtga
DBGET
integrated database retrieval system
