Neoarius graeffei (lesser salmon catfish): 132897606
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Entry
132897606 CDS
T10798
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132897606
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
132897606
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_8
TPR_17
TPR_14
TPR_16
TPR_11
TPR_CcmH_CycH
TPR_10
TPR-S
TPR_7
TPR_Slam
ANAPC3
TPR_20
ARM_TT21_5th
HMGL-like
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
132897606
NCBI-ProteinID:
XP_060794832
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Position
14:44385441..44387268
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AA seq
515 aa
AA seq
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MGVDLNRFYLYHCSLPDLFSQLSFIHACDSVISFSTSSTQDTFFKTRLLQLECHFTWALN
KNDVDLTDLLNRLEEQLNLDLGGETGAARAHSYKGFVKFLLGSNTEALSNFERSVELTKS
RGNDCDKLFVVAYGDLAWLYYHMGNFTECESYLSKLSEIKVKYPSVPYAEVLGEKGWTFL
KFSQKYYEWAKKCFKKALELEPEDPEWNAGLAIALYRLEYNLQNSAVSTETSTENSTDQL
RWAIATNPDDDVLKVLLALRLTVDKKYNEAESLVEQALESSPEHPNVLRYVAKFLRNQGS
VDRSIALLKTALEKVTNAAFIHHQLGLCYKQKIQNLRFAGSHHRTGAEIKQAQEQCIYHL
EIATKLKTGFILAMSDLALQYGVKRDMQRAEEMFHNAFQTAKERNENCQYVHLCYAEFQQ
YSMKCEPAAIKHYTECLNLNPKTYHGKKSAESLKKIAKRRIENNPEDGEAFGILGIIHKE
QGEKQQAIECFEKALSCEDNEDYLSHLCELQISLQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggatttaaatcgcttctatctgtatcactgtagtctccctgatctgttttca
cagttgagtttcattcatgcatgtgactcagttatttctttctctactagttcaacacaa
gacacatttttcaaaaccagacttcttcagctggaatgccattttacctgggctctgaac
aaaaatgatgtagatctcactgaccttctgaacaggctagaagaacagcttaacctggat
cttggaggggagacaggagctgcacgtgcacacagctataagggatttgtgaaatttctt
cttggctccaatactgaggctctcagcaactttgagagatctgtagagctcactaagtct
cgtggaaatgactgtgacaagttgtttgttgttgcttatggagaccttgcatggttatac
tatcacatgggtaatttcacagagtgtgaaagctacttgagtaagctgagcgagattaaa
gtgaaatatccatctgtcccatatgctgaggtgcttggagaaaaaggatggacattcctt
aagttttctcagaaatattatgaatgggcgaaaaagtgcttcaagaaggccctggagctg
gaaccagaggaccctgaatggaatgccggccttgctattgctctgtatcggctggagtat
aatctccaaaattcagcggtgtcaactgaaacttcaactgaaaattcaactgatcagctt
agatgggccatagccacgaacccagacgatgatgttcttaaggttctgcttgcacttaga
ttgactgttgacaagaagtacaatgaggcagagagcctagtggagcaagccttagagagc
tctccagaacatccaaatgtgcttcgatatgttgcaaagtttttgcggaatcaagggtct
gtggacaggtctattgccctcctaaagacagcattagagaaagtgaccaatgcagccttt
atacaccatcagctggggctttgctataagcaaaagatccagaatctgaggtttgcagga
agccaccacagaacaggtgctgaaattaagcaagctcaagagcagtgcatctaccacttg
gagatagcgaccaaactgaagactggtttcatccttgctatgagtgatctggccctccag
tatggggtgaagcgggatatgcagagagcagaagaaatgttccacaatgcatttcagaca
gctaaagaaagaaacgagaactgccagtatgttcatctctgttatgcagaattccagcag
tacagtatgaaatgtgagcctgctgccatcaaacactacactgaatgtctgaatttaaat
ccaaagacatatcatgggaagaaaagtgctgaaagtctgaaaaagattgcaaagagaaga
attgagaacaacccagaggatggagaggcctttggaatactcggaatcattcataaggaa
caaggagaaaagcaacaagccatagagtgctttgagaaagcgctgagctgtgaagacaat
gaggattatctcagtcatctttgtgaacttcagatttcattacagtaa
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