Neoarius graeffei (lesser salmon catfish): 132897770
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Entry
132897770 CDS
T10798
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Gene silencing
piRNA pathway
132897770 (tdrd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
Agenet
zf-MYND
Velvet
Motif
Other DBs
NCBI-GeneID:
132897770
NCBI-ProteinID:
XP_060794982
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Position
14:complement(51336525..51354711)
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AA seq
1160 aa
AA seq
DB search
MSRMNRAFSTSLVRPPLPLRRPSSGPGLVTPSSPSPVINNQGTCLPQEWSAMTSSSDALE
AESNRNEQGWMPVRDNSARAGLMSSPVTVSLCNYCSKKGNLKCTRCKKTCYCSVACQTED
WKAHRHICKPSTTENSTSDDPKDSPTRPCGASALESKVNSLFVGPKRVYLRDLRKNNFSK
GDEVQASVVEMRTPEKFFIHIQSVDMSETLKNITLNLQKTYSGSPTSVYQPEIEEICAVK
FSFDQNWYRGEIESVDLDNHIARVLYIDFGNEESVSFNQIHPLSANIDAAPPCALRCCIA
GVTAITSSWTGECCIALRQQVAGKILTFTVVDVLNSSTVLAVDAPLSTPGKNLSTFLIDQ
GYATKESTSTKPKIKQDINSLMTASLENFKRLSDGKNENTEAQPPEPLSQGVGDTFTAIV
THLQSPSEIICQKLENARIIQQLQKNLREHCAKIQASENFRPAPGTVCCSLFSEDNQWYR
AEVLAYSSEDRVCVGYIDFGNSEEVQLNQLRPLSMDLLALATQAIPCALADIKPTSDVWS
EETVVMLKQLVCNRFIRVEILGEQDGTALVSMVDEYSDPQTNVAELLVATGHAAVGNMER
KKEEEVESPNGPVDKLKWSCAELPVDGQKVVLVVSVLENPGQFYCYNYSAEGMQTLAELS
AALMKHCEADGTPFNPAVGDPCCALYSDGSWYRGIVQSLEGDGNANVYFVDYGNMCKVHA
AHLRAIKPSLLKHPFQAICCWLAGLEPVGGEWSKEAVQKFQTLCVGKQLSGRVLSVTEKG
YGVELEWSGCNVAAVLIAEQLAKPSGQESKPDSQAAMFIEPAEASPAPVPAENHSRTEQP
ATSPGQKPAASQSSTSTASFPLDWKTVELPSSETFQPQIAAVTSPSLFYVMNPREVNIEK
LQCVMTDVMKYCNKQTLPNQSMPLPGAACCAQFSGDKNWYRAVVLQATSTCANVVYADYG
NMERVPVSSLLPIPKALLQHPFQIVRCALSGKEHFPILWPPEVLELFNEQLSGKVLASVD
HFDGTFNLLNVTEHSAQGGSNINSVVLEALKKASGKSSTKTATQDTQVQGHEQTQAASTS
SASAHNLSADTVKPKPQNHKKEKKTTMTSMEKEDPQALPHSKVTDSASPTSCCCVSLEQK
IAHIEELLLLLVEQMGGRRK
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggatgaaccgtgccttttcaacatcactggttaggccgcccctgccgttgaga
agaccctcctccggtccaggtttggtgaccccgagcagcccgagccctgtaattaataac
cagggcacctgcttaccccaagaatggtctgcgatgactagcagctcagatgctctcgaa
gctgaaagtaacagaaacgagcaagggtggatgcctgtgagagacaacagtgctagagct
ggactcatgtcttctccagtaacagtgagcctgtgtaattactgcagtaagaaaggtaac
cttaaatgcacacgctgcaaaaagacttgttattgctcggtagcttgtcagactgaggac
tggaaggcccatcgccatatttgtaaaccaagtactacagaaaatagtacaagtgatgac
ccaaaggattccccgacccgaccttgtggagctagtgctttagaatccaaagtgaacagt
ctctttgttggaccaaagagagtttacctgcgagatttacgcaagaataacttttccaaa
ggagacgaagtccaggcatctgtggtggaaatgagaacccctgagaagttctttatccac
atccaatcagtggacatgtctgagaccttaaagaacatcactctaaatctacagaagacc
tacagtggttcacctacgtctgtgtaccagcccgaaattgaggaaatctgtgctgtgaaa
ttctcttttgatcagaattggtatcgaggtgaaattgagtctgttgatttggataaccac
attgccagagtgctctacatagactttggaaatgaggagagtgtcagctttaaccagata
cacccgctgtcagcaaatattgacgctgcaccaccatgtgctctgcggtgttgtattgct
ggagtaactgcaatcaccagcagttggacaggtgaatgctgtattgcattgcggcagcag
gttgctggaaagatcctgactttcactgtggtggatgtcctgaacagtagcactgtgctt
gctgtcgatgcgcctctgtcgacacctggtaagaatctcagtactttcttaattgaccag
ggctatgcgacaaaagagagcacttccacaaagccaaagatcaagcaagatatcaattct
ttaatgactgcatcacttgaaaacttcaagcgtttgtctgatgggaaaaatgaaaacact
gaagctcagccaccagagcccttgagtcaaggagtgggagacaccttcacagctatagtc
acccatcttcagtccccttcagagatcatctgccaaaagctagaaaatgcccgtattatt
caacagttgcaaaaaaatttgagagaacactgtgccaagattcaagccagtgagaacttc
cgacctgctcctggaactgtctgctgttcccttttctcagaggacaatcagtggtatagg
gcggaagttttggcgtattcctctgaggatcgtgtgtgtgtaggctacatagacttcggg
aactctgaagaggtgcagttgaatcagttgcgtcctctcagtatggatctgttggctttg
gctactcaggcaatcccatgtgctctggcagatattaagcccacttcagatgtgtggtct
gaggagactgtggtaatgctgaaacagttggtctgtaaccgcttcatccgtgtggagatt
cttggggagcaagatggaacagctttggtctcgatggttgatgagtacagtgatcctcag
actaatgtagctgagctactggttgctacaggtcatgctgctgtaggaaatatggaaagg
aaaaaagaggaagaagttgaaagccctaatggtcctgtagacaaattgaagtggtcctgt
gcagaacttcccgttgatggccagaaggtggtgctagtggtcagtgtactggaaaatcca
ggccaattctattgctataattacagcgcagaaggcatgcagaccctggcagagttgtcc
gctgctctgatgaagcactgtgaggctgacgggactcctttcaaccctgctgttggagac
ccctgttgtgcactctacagtgatgggagctggtacaggggcattgtgcagagtcttgag
ggagatggaaatgcaaatgtgtactttgtagattatgggaacatgtgtaaagtacatgca
gcccatctaagagccatcaagcctagcctcctcaaacaccctttccaggccatatgttgt
tggcttgcagggcttgagcctgtaggaggggagtggagtaaggaagcagtgcagaagttc
cagactctgtgtgtggggaagcagctgagtggcagagtgttatcggtcactgagaagggt
tatggagtggagctggagtggagtggctgcaacgttgctgctgtactcattgcagaacag
ctcgccaaaccttcaggacaggagagcaagcctgattcacaagcagctatgttcattgaa
ccagcagaagcatctcctgcaccggtgcctgctgagaatcactcgcgcactgagcagcca
gctacaagtcctggacagaaacctgccgcatcgcagtccagtacatcaactgcttcattt
cctctggactggaagacagtggagttgccttccagtgagactttccagcctcaaatagca
gcagtgaccagcccaagtctcttctatgtgatgaatcctagagaggtgaacatcgagaag
ctgcagtgtgttatgacggatgtgatgaagtattgtaacaagcagaccctgcccaaccag
agcatgcctttacctggagcagcctgctgtgctcagttctcaggtgacaaaaattggtac
agagctgttgtattgcaagctacaagcacatgcgcaaatgtggtttatgcagactatggg
aacatggagagggttcctgtctccagcctcctgcccatcccaaaagcacttctgcagcac
ccgtttcaaatagttaggtgtgctctttcaggtaaagaacacttcccaattctgtggcct
cctgaggttttggagctttttaatgaacagctgagtggcaaagtactggcctctgtagat
cattttgatggcacctttaacctgctaaatgtgactgagcactcagcccaaggaggcagc
aacatcaactctgttgttttagaggcactaaagaaagcttctggcaagtccagcacaaaa
acagcaacccaagacacacaggtgcagggacatgagcagacacaggctgctagcacgtcc
tctgcctcagctcataatttatctgcagacactgtgaagccaaaacctcagaatcacaaa
aaagaaaaaaagacaacaatgaccagcatggaaaaggaggatccacaggcccttccacat
tcaaaggttactgatagcgcatctcccacttcatgctgttgtgtgtcccttgagcagaag
attgcccatattgaagagttgctccttctgcttgttgagcaaatgggtggaagacgaaag
taa
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