Neoarius graeffei (lesser salmon catfish): 132897875
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Entry
132897875 CDS
T10798
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03020
RNA polymerase
ngra04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132897875 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
132897875 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132897875 (polr3a)
Enzymes [BR:
ngra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132897875 (polr3a)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
132897875 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
132897875
NCBI-ProteinID:
XP_060795111
LinkDB
All DBs
Position
14:complement(3084549..3119603)
Genome browser
AA seq
1389 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLPYGVLDHRM
GTSEKDRGCETCGKVLADCLGHYGYLDLELPCFHIGYFKAIIGILQMICKTCSRIMLSKE
ERQQFLDYLRRPGLPYLQKRGLKKKISDKCRKRNVCLYCGSFNGAVKKCGLLKIIHEKYK
SSKKVMDPIVSDFLQSFDTAIEHNKEVEGLLSRAQENLNPLVVLNLFRRIPSEDVPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANMELMRKLVKNGPDIHPGANF
IQQRHMQMKRFLKYGNREKMAQELKLGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGGYLLTLKDSFFDRAKVCQIIASILVGKDEKLKIALPHPAIIKPVRLWTGKQI
FSLILKPSKLCPVKANLRTKGKQYCGRGEDLCHNDSFVVIQNSELLCGSMDKGTLGSGSK
NNIFYILLRDWGQVEAANAMSRLARVGPTYLSNRGFSIGIGDVTPGQGLLKAKQELLDAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILRELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYNCADEPALSKNELVLTADSIMKRNDFTC
CRDTFLQEIKKFVSSMGEKIKKTRDKYGINDNGSTEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDTEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYCICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKQELPKVV
VQGIPEVSRAVIHIDEQSGRQKFKLLVEGDNLRAVMATHGVNGNRTTSNNTYEVERTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHRADKEPNPPKRSLLFD
TADFHISLA
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacagatgtggccaaaaagataagccacatctgtttt
gggatgaagtcggcggagcagatgcgtcagcaggctcacattcaggtggtcagtaagaac
ctgtacagtcaggacacctctcacacaccgctgccctacggagtgctggaccaccgcatg
gggacgagtgagaaggaccgtggctgtgagacatgtgggaaggtcctggcggattgtttg
ggtcattacggttacttggatttggagctgccctgcttccacatcggctactttaaagcc
atcatcggcatcctacagatgatctgtaagacgtgttctcggatcatgctgagtaaagag
gagaggcagcagttcctggattatctgcggcgtcctgggttgccatatctacagaaacgt
ggcctgaagaagaaaatctcggataagtgcaggaagaggaatgtgtgtctttactgcgga
tccttcaatggtgcggtgaagaaatgtggtctgttaaagatcatccatgagaagtataaa
agcagtaagaaggtaatggatcccatcgtctctgatttcctccagtccttcgacacggcc
atcgaacacaacaaagaggtggaggggctgctcagccgcgctcaggaaaacctgaaccct
ctggtggtgctgaatcttttccggagaattcccagtgaggatgttcctctgctgctgatg
aacccagaggcggggaaacctgctgacctcatcctgacccgcctcctggtcccacccctc
tgtatccgcccctctgtcgtcagtgacctcaaatcaggtaccaacgaggacgacctcacc
atgaagctgacggagatcatcttcctcaatgatgtcatcaagaagcaccgcatgtcagga
gcgaagacgcagatgattatggaggactgggacttcctgcagctgcagtgtgctctctac
atcaacagcgaactgtcaggaatcccactcaacatggcgcccaagaagtggaccagagga
ttcgtacagagactgaagggaaaacagggacgtttccgtggtaacctgagtggaaagaga
gtggatttttccggaagaacggtcatctctcctgacccgaacctgaggatcgatgaggtc
gctgttcctgttcacgtcgccaagatcctcacttacccagagaaggtgaacaaggcgaac
atggagctgatgaggaagctggtgaagaatggaccagacattcatcctggagcaaacttc
atccagcagagacacatgcagatgaagaggttcctgaagtacgggaacagagagaagatg
gctcaggagctgaagctgggggacgtggtggagagacacatgattgatggggacatcgtc
ctgtttaaccgccaaccatcactacacaagctcagcattatggcacacatagcacgtgtg
aaacctcaccggacatttcgctttaatgagtgtgtgtgtacaccgtataacgccgacttt
gatggggatgagatgaaccttcaccttccacagactgaggaggccaaagctgaggctctc
gtactcatggggacgaaagcaaacttggtgaccccaaggaatggtgaacctctgattgct
gctattcaggactttctcacaggtggttatctgctcaccctgaaggactcgttctttgat
cgagctaaagtctgtcagatcatcgcctccatcctggtgggcaaagatgagaagctcaaa
atcgccctccctcatcctgctattataaagcctgtgcgtttatggacagggaagcagatc
tttagtttaatcctgaagcccagtaagctctgcccagtgaaggcgaacctgagaaccaaa
gggaaacagtactgcgggagaggagaggacctgtgccacaatgactccttcgtggtgatc
cagaacagtgagctactgtgtggcagtatggataaaggcacgttgggttcaggatcaaag
aacaatatcttctacatcctgctgagggactggggtcaggtggaggcagccaacgccatg
agccgccttgctcgagtcggacctacgtacctctctaaccgtgggttctctatcgggatc
ggggacgtgacccctggtcagggtctgctgaaggccaaacaggaactgctcgacgcagga
tacaaaaagtgtgacgagtacattgaggccctgaatacaggaaaactacagcagcagcca
ggttgtacagctgaagagacactggaggcgctgatccttcgagagctgtcggtgattaga
gatcacgctggcagtgcgtgtctgagagagctggataagagcaacagtcccctcatcatg
gctctgtgtggctcaaaaggctcctttattaatatttctcagatgatagcgtgtgtgggt
cagcaggccatcagtggctctcgagttcccgacggctttgagaatcgatcgctgccgcac
tttgagaaacactcaaaacttcctgcagctaaaggctttgtggcagatagtttctactct
ggtttgacccccactgagttttttttccacactatggctggccgtgaggggctggtggac
acggcggtgaaaacagcagagactggatacatgcagaggcgtttggtgaagtctctggag
gatctgtgttctcagtatgacctcaccgtgcgtagctccaccggtgacatcatccagttc
atctatggaggagatggactcgaccccgccgccatggagggaaaagacgaaccgctcgag
ttcaagagggtgctggataacatccgggcggtctacaactgtgctgatgaaccagcgctg
agtaaaaacgagctggtgctgactgcggactccatcatgaagaggaacgacttcacctgc
tgcagagacaccttcttacaggaaataaaaaaatttgtcagcagcatgggggagaaaatc
aagaagaccagagacaagtacggcataaatgataatggatccacagagcccaaagttttg
taccagctggacagaatcacacccacacagctagagaagtttctggaaacatgcagggac
aagtacatgagagctcagatggagccgggctcggctgtgggcgctctgtgtgctcagagt
atcggagaacccggaacccagatgaccctgaagacgtttcactttgcgggtgtggcgtcg
atgaacatcacgctgggggtaccacgcatcaaagaaatcatcaacgcctcgaagaacatc
agcaccccgatcatcactgcacacctggacactgaggatgacgcagacttcgctcgcctg
gtgaagggcaggatcgagaagacgctccttggggagatctcggagtacatagaggaggtg
ttcctgcctgatgactgcttcatcctggtgaaactctcactcgagaggatccgccttctc
cgactggaggtgaatgcggagaccgtgcggtactgtatctgtatgagtaagctgcgggtg
aaacctggtgatattgcggttcatggtgaggcagtggtgtgtgtgtctcctcgagagaac
agcaagagctccatgtactacgttctacagtcactcaaacaggagttacccaaggttgtt
gtacagggtattcctgaggtttcccgcgctgtgatccacattgatgaacagagcggccgt
cagaagttcaagttgctggtggagggggataacctgcgcgctgtcatggcaacacacggt
gtcaacggcaaccgcaccacgtccaacaacacgtatgaggtggagaggacgttgggcatt
gaggctgcaaggacgaccatcattaatgagatccagtacaccatggtgaatcacggcatg
agcatcgaccggcgtcacgtcatgctgctcgcggatctcatgtcctacaagggggagatt
ctgggcatcactcgcttcggtctggccaagatgaaggagagcgtcctgatgctggcctcg
tttgagaagaccgctgatcatctgtttgatgctgcgtacttcgggcagaaagattctgtg
tgtggtgtgtcggagtgtataataatgggaattcccatgaacatcggcactggactgttt
aaactcctacaccgagccgacaaagaacccaatcctccaaagagaagcctgctgttcgac
acagccgatttccatatctcactcgcctaa
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integrated database retrieval system
