Neoarius graeffei (lesser salmon catfish): 132897879
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Entry
132897879 CDS
T10798
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
132897879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132897879
Ion channels [BR:
ngra04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
132897879
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
132897879
NCBI-ProteinID:
XP_060795115
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Position
14:3218852..3377472
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AA seq
1217 aa
AA seq
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MLPAKDGDVRLVPPQNSMMVNPRKMDLIIPYVANVQCDSNGQRMWWAFLASSMVTFFGGL
FIILLWRTVRYLWTVCCHCNTKKKDVQRISSVEKKDSTVVSEVGWMTSVKDWAGVMISAQ
TLTGRVLVVLVFVLSIGALVIYFIDSSNPIESCQHFDKDIALQVDMAFNIFFLLYFGLRF
IAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILK
TSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNFQPLSYWECVYLLMVTMSTV
GYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVC
GHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNP
HDLARVKVESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAH
LLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSYIKIEEDTWQKYY
LEGVANEMYTEYLSSAFVGLSFPMVCELCYVKLKLLLIAIEYKSDQRESSTVINPGNHMK
MQEGTLGFFIASDAKEVKRALYYCKACHDDITDPKTIKKCGCKRSKMAVSRRMQLACCLG
CGEAEHGCSCTSRSTRSHMESPACALPLSPTSVNDKSATLRSSKSNYNGYIKSTMDAPAV
QQSALSPKKKQRNGGMRTSPSCSPKTIRHDPVLIPSHDQMETMDDNVKRYDSTGMFHWCP
SRDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALVGLRNLVMPLRASNFHYHELKHIVF
VGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDVSLQ
DKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPENSPVHALDRQTSISTGANI
PIITELAKSDRLLNAVCVRQDKSCGTNIPMITELVNDSNVQFLDQDDDDDPDTELYLTQP
FACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSDTHT
LANRDRCRVAQLALYDGPFAQLGEGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSMPSQC
TKRYVITNPPYEFELVPTDLIFCLMQFDHNAAQCRSTLSHSSHSSHSSSKKSSSVHSIST
KHTKSREPRDKPKYVPL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcttccagctaaagatggtgacgttcggctcgtgcccccccaaaactccatgatggtg
aacccgaggaagatggacctgatcatcccgtatgttgccaatgtgcagtgtgacagtaat
ggccagcgcatgtggtgggccttcctcgcctcgtctatggttacgttcttcggcggcctc
ttcatcatcctgctgtggaggacggtccggtacctgtggaccgtctgctgtcactgcaac
accaaaaaaaaggatgttcagcggatcagcagtgtggagaagaaggacagtacggtggtc
agtgaggtgggctggatgacctcggtgaaggactgggccggggtcatgatctctgcacag
acactcaccggacgcgtgctggtggtgctggtgttcgtcctcagtatcggagcgctcgtc
atttacttcatcgactcctccaatcccatcgagtcatgtcaacactttgacaaagacatt
gcactacaggtggacatggccttcaacatcttcttcctgctctacttcggcctgcgattc
atcgcggcgaacgataagctgtggttctggttggaggtgaactcggtggtggatttcttc
accgtgccgccggtgtttgtgtctgtgtatctgaacaggagctggctgggtttgaggttt
ttaagagccttacggttgatacagttctctgaaatattacagtttttaaatatcctgaaa
accagcaattctataaagttggtgaacttgtgctcgatctttattagcacatggctaacc
gctgcaggtttcatccacctggtggaaaactcgggcgatccatgggaaaacttccagaat
ttccagccgctgtcttactgggagtgcgtgtatttgctcatggtgacgatgtccactgtg
ggttacggagacgtgtgtgctaaaactacactcggacgcctcttcatggtcttcttcatc
ctcggtggactggccatgtttgccagctacgtccctgaaatcatagaattaataggaaac
cgtaagaaatatggcggttcctatagtgcagtaaatggcagaaagcatattgttgtgtgc
ggtcacatcactctggaaagtgtctccaacttcctcaaagacttccttcacaaggacagg
gatgatgtcaatgtagaaattgtttttctccataatatttcccctaatcttgagttggaa
gccttgttcaagcgccacttcactcaggtagagttctaccagggctccgtcctaaatccg
cacgatctggcccgagtcaaggttgaatcagcagatgcgtgtttaattttagccaataaa
tactgcgcagaccccgacgctgaggacgcgtccaacatcatgagagtgatatctattaaa
aactaccatccaaagatccggatcatcacacagatgctgcagtatcacaataaggctcat
ctgttgaacatcccgagctggaactggaaggaaggtgatgatgcgatttgtctggcagaa
ctgaagctgggcttcatcgctcagagctgcttagcgcaggggctctccaccatgctggct
aatctcttctccatgaggtcgtacattaagattgaagaggacacgtggcagaagtattac
ctggaaggagtagctaatgaaatgtacactgagtatctgtccagtgcctttgtgggttta
tcgttccccatggtgtgtgagttgtgttatgtgaagctgaagctgctcctgatcgccatc
gagtataaatctgatcagagagagagcagtacggttattaacccaggtaatcatatgaag
atgcaggaaggaactttggggttctttattgccagcgatgccaaagaagtaaagagagct
ctttactactgcaaagcttgtcatgatgacatcacagacccaaaaacgataaagaagtgc
ggatgcaaacgatccaagatggcggtcagccgccgaatgcaactggcatgttgtttaggt
tgcggtgaggctgagcacggctgctcgtgcacatctcgtagcactcgtagtcacatggag
tctccggcatgtgccttgcctctttctcccacctctgttaatgataagtcggccacttta
cgctcctctaaaagtaactataatggatatatcaaatcaacgatggacgccccggcagtg
cagcagtctgccctgtcacctaagaaaaaacagcgcaatggaggaatgagaacttcaccc
agctgctctccaaaaacgatacgacacgaccctgtactgatccctagtcatgatcagatg
gagacgatggatgataatgtgaagaggtacgattccaccggaatgttccactggtgtcca
tccagagacattgagaaggtcatcctgacccgtagtgaggcagccatgacggttctaagt
ggccatgtggtagtgtgtatttttggcgatgtgaagtcggccttggtgggtctgcggaac
ctggtgatgcctctgagagcgagtaacttccactaccatgagctgaaacacatcgtgttt
gtggggtcactggagtacttgaagagggagtgggagacgttacacaacttccccaaagtc
tccattttacctggtactcctctgagcagagcggatctgagagctgtcaacattaacctg
tgtgacatgtgtgtgatcctgtcagccaatcagaacaacatcgatgatgtgtctctgcag
gataaagagtgtatcctcgcctcactcaacatcaaatccatgcagtttgatgacagtatc
ggccttttacaggccaactcgcagggtttcactccccctgggatggatcgctcgtctcct
gaaaacagtcctgttcatgctttggatcgacaaacttccatcagcacaggagcgaacatc
cccatcatcaccgagctcgcgaagtcagacaggctgctgaatgcagtgtgtgtgagacag
gacaagagctgcggaaccaacattccaatgattactgaactggtaaatgattctaacgtt
cagttcctggatcaggatgatgatgatgacccggacactgagctctacctcacacagcct
tttgcctgtggaaccgccttcgctgtcagcgtgcttgattccctaatgagtgctacgtac
tttaatgacaatatcctaacgttaataaggacgttagtgacgggcggggccactcccgag
ctcgagggtttgttagcggaggagaacgcactgcgcggtggctacagcgacacacacacg
ctggccaacagggaccggtgtcgagtggcacagctcgccctgtacgacgggccgttcgcc
cagctcggggaaggtgggtgttatggcgatttattctgtaaagcgttaaagacctacaac
atgctgtgtttcgggatttaccgcttacgagacgctcacctgagcatgccgagtcagtgc
accaaacgctacgtgatcaccaatcctccgtacgagttcgagctggtccccacagacctg
atcttctgtttaatgcagtttgatcacaacgcggctcagtgccgctccacgctctcacac
tcctcacactcctcacactcgtccagtaaaaaaagctcatctgttcactccatcagcacc
aaacacaccaagagccgagagccacgagacaagcccaagtacgttcccctttaa
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