Neoarius graeffei (lesser salmon catfish): 132897957
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Entry
132897957 CDS
T10798
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132897957 (vps35l)
Membrane trafficking [BR:
ngra04131
]
Protein recycling
Others
Retriever complex
132897957 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF5667
Motif
Other DBs
NCBI-GeneID:
132897957
NCBI-ProteinID:
XP_060795249
LinkDB
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Position
14:complement(11534869..11574382)
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AA seq
966 aa
AA seq
DB search
MASVQWHSRRRNYDAELRSCRVPAVSVQSGDYHPLKPITVTDSKSRRGARKGSTSSSSSS
SSSAAPDPLSSMLEGTDPLSLFAAAASANETPALSHSSSSVELGRKRRDKEEEVGCDFEP
WSAKRGEILARFTTTEKLSINLFMGSDKSKATSPSSAVSEKVRTRLEELDDLEEGSQREL
LNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVILFYPSKFVLITD
ILDTFGRLVYERIWSMCSDPAPLPDSFSVEDVNDTAKETCLNWFFKIASIRELIPRLYVE
AAILKCNRFVNKSGIRETLPRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKN
FFDLLASFRQIHSDSVQNQLVIQRVEIPVYLTLYSPAIHWILQCVAYRAPDVLLTEMMER
CKKLGNNALLLNSVMWAFRAEFVAARATDFISMIKECDEAGFPKHLLFGSLGRSLACADP
PESERLPILNEAWKVITKVRNPQDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDR
AFEDAYPQLQSVMMKILTYFHNFSVLFSMEKFLPFLDMFQKDSVRVDVCKSIMDVFIKHQ
QEPTRDPVILNALLHVCKTMHDSVNALTVEDEKRALALLINGFIRMVSFGRDFEQQLSFC
VEARATFCNLEPVVIQLIHTVNHLAMETRRVMGGNHSRKTAAFVRACAAYSFITIPSLSS
IFSRLHLYLLSGQVALANHCLSQADSFLKAAVSILPEVPRVINVEGKQRSSEPFLLDFIN
NFLSTLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQESYL
YTIPKVDSNETLYGGDPKFVAEISRVCETVIGQVLDYLKTLSQDEGARRQGVLAFSLFSC
LLAHGDLRNNKLNQLAVNLWNLSHKNGYCDTRTSVRTLEHIKQQAQQPDMAHLSDMLLRL
SLQSRA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgttcagtggcattcccgcaggcgaaactacgatgcagagctgcggagctgc
cgtgtgccagccgtctcagtgcagagcggcgattaccatccgctgaaacctattacagtg
acagattccaagtcccgacgtggagcgcggaaaggcagcacgtcttcatcgtcgtcttcc
tccagctctgctgctcctgaccccctgagctccatgctggagggcacggatcctctgtcc
ctgttcgctgccgccgcctcagccaatgaaactcctgcgctgtctcatagcagctcttcc
gtggagctggggaggaagcggagggacaaagaagaggaagttggctgtgactttgagccg
tggtcggctaaacgtggcgagatcctggccaggttcacaaccacagagaagctgtccatc
aatctcttcatgggctccgacaaaagtaaagccaccagtcccagctctgcagtctcggag
aaagtgcgcactcgtctggaggagcttgatgacctggaggaaggctcccagagggagctg
ctgaacctctctcaacaggattatgctaaccggatcgaggaactgaatcagtccctcaaa
gaagcttgggcttctgaccagaaagtcaaagcgctcaaaatcgtcattcagtgctccaag
ctgctttcagacacgtctgtgatcctgttctaccccagcaagttcgtcctcatcaccgac
atcctcgacacgttcggtcgcctggtgtacgagagaatctggtccatgtgctcggatcct
gctcctcttccagactcgttctctgtggaggatgtaaacgacacagccaaagagacctgc
ctcaactggttcttcaaaatcgcctccatcagagaactcatccctcgcctatacgtcgag
gctgccatactgaagtgcaatcgctttgtgaacaaatccgggattcgggagactcttccg
cggctcaccgctatgatccgagggatcggagaccctttagtggccgtgtacgctcgagcc
tatctgtgcagggtgggcatggaggtagccccacacctgaaggacagcctgaacaagaac
ttcttcgacctcctggcgtccttccgacagattcacagcgacagcgttcagaatcagctg
gttatccagagggtggagattcccgtctacctcacgctgtattctcctgccatccactgg
atcctgcagtgtgtggcctaccgagcacctgatgtgctgctgacagaaatgatggagcgg
tgcaagaagctgggtaacaatgctctcctgctaaactccgtcatgtgggccttcagggcc
gagttcgtggctgcaagagccaccgattttatcagcatgatcaaggagtgtgacgaggct
gggtttcccaagcacctgctgttcggctctctgggccgcagcttggcctgcgccgaccct
cctgagagcgagaggttgcccatccttaacgaagcctggaaggtcatcacaaaagtgcgc
aaccctcaggactacatcaactgtgctgaaatttgggtggagtttacctgccgtcacttt
accaaaagagaggtgaataccgtactggctgacatcatcaaacacatgacccctgatcgg
gcgtttgaggacgcttatccacagttgcagtcagtgatgatgaagatcctcacctacttc
cacaacttctccgtcctcttctccatggagaagttcttacccttcttggacatgttccag
aaagacagtgtgagggtggacgtgtgtaaatccatcatggacgtctttatcaaacatcag
caggagccaactcgtgatcccgtcatcctcaacgctctgctccacgtctgtaaaaccatg
cacgactctgtgaatgctctcacagtggaggatgagaaaagagctctcgctctgctgatc
aacggcttcattcgcatggtatcttttggccgtgactttgagcagcagttgagtttctgc
gtggaggccagagccacgttctgtaatctggagccggttgtgattcagctcattcatacg
gtgaaccatttggccatggagacgagacgagtgatgggtgggaaccattcgcgcaagacg
gccgcgttcgtccgggcgtgtgcagcgtacagtttcatcaccattccgtctctcagcagc
atcttcagccgcctccatctttacctgctttcaggacaggtggctttggccaatcactgc
ctttcccaggccgattcgtttctgaaggcagcggtcagtattttgcctgaggtgccacgt
gtcattaacgtggagggtaaacagcgttcttctgaaccctttctcctcgacttcatcaac
aacttcctgtccacgctgctggtagtgccggaccaccctgagcagggcgtgttatacttg
gtgagaggattgttaaacatggtgcaggattacacgtgggaggacaacagcgatgctaaa
gtacgtgtgtacatcagtgcattaccgctgctggctgccatgagtcaggagagctatctc
tataccattcctaaagtggactccaacgagacgctgtatggtggtgaccccaagtttgta
gctgagatcagtcgagtgtgtgaaactgtgattggccaggtgctggattacctcaagact
ctgagccaagatgagggagcacgccggcagggagtgcttgctttctctctgttcagctgt
ctgttggctcatggagatctgcgcaacaacaaactcaaccaactcgctgttaatctgtgg
aacctgagtcataagaacggctactgcgacacacgcacatcggtgcgcaccctggagcac
atcaagcagcaggcccagcagcctgacatggctcacctctccgacatgctcctgcggctc
tccttgcagtcacgagcctga
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