Neoarius graeffei (lesser salmon catfish): 132897990
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Entry
132897990 CDS
T10798
Symbol
drosha
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132897990 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132897990 (drosha)
03009 Ribosome biogenesis [BR:
ngra03009
]
132897990 (drosha)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132897990 (drosha)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
132897990 (drosha)
Messenger RNA biogenesis [BR:
ngra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
132897990 (drosha)
Ribosome biogenesis [BR:
ngra03009
]
Eukaryotic type
90S particles
RNase
132897990 (drosha)
Prokaryotic type
rRNA processing factors
132897990 (drosha)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
132897990 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
132897990
NCBI-ProteinID:
XP_060795300
LinkDB
All DBs
Position
14:13581639..13694496
Genome browser
AA seq
1305 aa
AA seq
DB search
MSRRVRERDIVHMSFHPGRGCPRGRPPPQNYPPVPLRLPPPQSIVPSMPPPYPYDPSTPH
CSTYSPQCTNTYMPNMPPRPEFPPYPVPAPSQGPQCPLRPPFPPPPLHQGFPEPPNFPPP
PLPVPTGGPAPSQGSYPYVPPPPPPPPSMPPSVPFQPPYSMNYPPQPHLTPLPPNFYPPS
ESGSFKPMEHFHHFKSDKSPERPRRHKSYGYGGYSGHGERRERGRSPDRRRQEGGRYRSE
NERGRTPPRHRSRERSRERYRPRDSRSSPPSDRHRKRARSRSGSRERKRGRMEEDRERER
ERDRDRERERERERRVEAAGGNRDRSSRETEDEEEEELLKPAWIRCTHSENYYSNDPMDQ
VGDSTVVGTSKLRDLYERFEEELGRRQERAKSSRPKWEPPKTKLDLDHDESSSDSECDSD
GDSSCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAKARRTGIR
HSIYPGEETVKPCRPMSNNAGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFS
HTPLTNIPLCRVIRFNIDYTIHFIEEMAPENYCVKGLELFSSYLFQDILELYDWNLTGPE
ETESPTCQRFHFMPRFVRFLPDGGKEVLSMHQVLLYLLCSNKPLVPEEEIANMLQWEELE
WQKYAEECKGMIVTNPGMKPSSVRIDQLDREQFNPNVITFPIIVHFGIRPAQLSYAGDPQ
YQKLWKSYVKLRHLLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWK
TGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYMFKERCLLQLAMTHPSHHLNFGMN
PDHARNSLSNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPTPSRINHNERLE
FLGDAVVEFLTSVHLYYLFPTLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPD
LCRESDLRHAMANCFEALIGAVYLEGGLEEAKQLFGRLLFNSEDLREVWLHYPPHPLQVQ
EPVTDRQLIESSPVLQKLTDFESAIGVFFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFL
GDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAITNDKTKRP
VALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCC
LTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDAL
EKYNFPQMAHQKRFIERKYRQELKEMRRERERQERESDDAEDTRK
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaagagtgcgtgagagagacattgtgcatatgtcctttcatcctggacgtgga
tgtccacgagggcgccctccccctcagaattacccccctgtcccactgcgtttgccccct
cctcagtctattgtgccctccatgccccctccctacccctatgacccctcaacgccccac
tgttccacatacagccctcagtgcaccaacacctacatgcccaacatgccacctcgtcct
gaattccctccctaccctgtcccagcaccctcccagggtccgcagtgccccttgcgccct
cctttcccacccccgcctctgcaccagggcttcccagaacctcctaattttcccccaccc
cctttgcctgtgcctacaggtggccctgccccttctcagggctcatatccttatgtcccg
cctcctccccctcccccaccctcgatgcctccgtctgtaccctttcagcctccctactcc
atgaattaccctcctcagccacaccttacccctctccctcctaatttctaccccccctct
gaatccggttccttcaagcctatggagcatttccatcacttcaagagtgacaagtctcct
gagcggccgcggcgtcacaaaagctacgggtacggtgggtacagtgggcacggcgagcgg
cgcgagcgagggcggagtccggacaggaggcgacaggaaggggggcggtaccggtcagag
aacgagaggggccgtactcccccaagacaccgcagccgagagcgcagcagggagcgctat
cgtccccgggacagcagaagctctcctccatcggaccgacacaggaaacgagcacgcagc
cgctcaggaagcagagagagaaaacgtggacgaatggaggaggatcgagagagagagaga
gaaagggacagggaccgagagcgggagagggagagagagaggagggtggaggcagcagga
ggaaacagagacagaagctccagagagacggaggatgaggaggaggaagagttactgaag
ccggcatggatccgctgtactcactctgagaactactactccaacgaccccatggaccaa
gtgggtgactcaacagtcgtgggtacgagtaaactgagggacctgtacgagcggtttgag
gaggagcttggacgacggcaggaacgtgccaaatcctcccgccccaagtgggaaccaccc
aaaaccaagctggacttggaccatgacgagagctcgagtgattcagagtgtgactcggac
ggggacagcagttgctctagcagctccgactctgaggtgtttgacgtgatcgcagagatc
aagcgtaagaaagcacaccccgaccggctgcacgacgagctgtggtacaacgacccagga
cagatgaacgacggtccattgtgtaagtgcagcgctaaagccagacgcacaggaatccgg
cacagtatttaccctggggaagagacagtgaagccgtgtcgtccgatgagcaacaacgcc
gggaaactcttccattacaggatcaccgtgtctccgcccaccaacttcctgacggaccgg
ccgacggtgattgaatacgacgatcatgagtatctgtttgaaggattttctctcttctca
cacactcctctcactaatatcccgttgtgtagagtgattcgcttcaacatcgattacacc
atccacttcatcgaggagatggcgcctgagaactactgtgttaaaggtctggagcttttc
tcttcatacctcttccaagacatcctggagctgtacgactggaacctcacaggtccagag
gaaacggagtctcccacctgccagaggttccacttcatgcctcgctttgtgcgattctta
ccagatggaggtaaagaggtgttgtcgatgcaccaggttctgctgtatctgttgtgcagt
aataaaccgcttgttccagaggaggagatcgctaacatgctacagtgggaggagcttgaa
tggcagaaatatgcagaggagtgtaaaggaatgattgtcactaatcccggcatgaaaccc
agctcggtgaggatagaccagttggatcgggaacagtttaacccgaatgtcattacattc
ccgatcattgtccattttggaatccgtccggctcagctcagctacgctggagaccctcaa
tatcagaaactgtggaaaagctacgtgaagctgcgccacctgctggccaacagccccaaa
gtgaaacagatcgacaagcagaagctcacacagagagaggaagctctgcaaaagatcagg
cagaagaacacgatgaggagggaagtgacggtagaactcagcagccaaggcttctggaaa
accgggatacgatctgacgtctgccagcatgcgatgatgctcccggttctgacccaccac
attcggtaccaccagtgtctgatgcacctggataagctgataggttacatgtttaaagag
cgatgcctcctgcagctggccatgactcacccgagtcatcacctgaacttcgggatgaac
cctgatcacgcccgtaactctctgtccaactgtggcatccgtcagcccaaatatggcgac
aggaaggtccaccatatgtacatgaggaaaaaaggaattaacacattgattaacatcatg
tcccggctggggcaggacgaccccacaccttccaggattaatcataatgagcgtctggag
tttcttggtgatgctgttgttgaatttctaactagcgttcacctgtactacctgttcccc
accctggaggaaggaggattagcgacatatcgcactgccatcgttcagaatcagcacctc
gccatgctggctaagaaactggagctggaccgcttcatgctgtacgctcatggcccggat
ctgtgtcgagagtctgacctcagacacgccatggctaactgcttcgaggctcttataggt
gctgtgtatctggaaggtggattagaagaggccaagcaattgtttggcaggctgctgttc
aacagtgaggacctaagggaagtgtggctccactatccgcctcatccattacaggtgcag
gagccggtgaccgacagacagctcatcgaatcgtctcccgtcctacagaagctcacagac
ttcgagtcagccatcggagtgttcttcacacacgtccgtctactcgctcgagccttcaca
ctgcgcaccgtcggcttcaaccacctcacactaggtcataatcagaggatggagtttttg
ggagattccatcatgcagcttgtagccaccgagtatctattcatccatttccctgaccat
catgaaggtcacctgacgcttctgcgcagctcgttggtgaataacagaacacaggcgaag
gtggcggaggaattggggatgcaggagtatgcaataacgaatgacaagaccaaacgacct
gtcgctctgcgcaccaaaacacttgctgacctgctggagtctttcattgcagcactttac
atagacaaagaccttgaatatgttcacacattcatgaacgtctgcttcttcccaagatta
aaggagtttatcctgaatcaggactggaatgatccaaagtctcagctccagcagtgctgc
ctcacccttcgcaccgagggcaaggagcccgacatcccactctacaagacactacagaca
gtcggcccgtctcacgcccgcacctacacggtcgctgtgtactttaaaggagagagaatt
ggttgtgggaaagggccgagtatacaacaggctgagatgggagccgccatggatgctctg
gagaaatataacttccctcagatggcccatcagaagcgcttcatcgagcggaagtaccgc
caggagctgaaggagatgaggagagagagagagcggcaggagcgagagagtgatgacgcc
gaagacactcgcaaataa
DBGET
integrated database retrieval system
