Neoarius graeffei (lesser salmon catfish): 132898251
Help
Entry
132898251 CDS
T10798
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngra01002
]
132898251 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132898251 (usp42)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132898251 (usp42)
Peptidases and inhibitors [BR:
ngra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132898251 (usp42)
Ubiquitin system [BR:
ngra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132898251 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
132898251
NCBI-ProteinID:
XP_060795718
LinkDB
All DBs
Position
14:43562293..43586715
Genome browser
AA seq
1141 aa
AA seq
DB search
MTIVDKASEKSDFESAQSKHSGSLTPVSSGDVADGSSNWSVDSSTAECSRVMATCVAPSL
EVTVYGGTTALPAGRPNEQVAMNCGDGITLPQKILFPSERLSLKWTQVHRIGAGLQNLGN
TCFLNSALQCLSYTAPLANYMLSREHSKTCHESGFCMLCTMQNHIIQVFANSGNAIKPLG
VLHELKRIAKHFRCGNQEDAHEFLQYTVDAMQKSCLPTNKLDRQTQATTLIHQIFGGYLR
SRVKCMNCKAVSDTFDPYLDIALDIKNAPNITKALELFVKAEQLDWENAYKCSTCKEMVQ
ATKRLSIHRNSNVLTISLKRFANFNGGKISKDVRYSEYLDLRPYMSQSHGDPQIYGLYAV
LVHSGFSCYAGHYYCYVKASNGQWYQMNDSSVTPTDIRSVLNQQAYLLFYIKQGSTDLKN
GDLNQMGLTPGHSSHRPVVTPKLNGHSHTSSSIIGPQLPPHMLKSNSHVNGNGSSKEYHS
GSKPSSSDISGVNKATSSLTYCSSTTSSSASHQPVHPTSIPEPQKRPKMSFLVGSGKVVR
GNRAPSSSSSSSSSDSYSYPQSSSSTSKFQHSKQVNGTSSYHSATFLVPYDEESSEESDQ
ESRVLDSGTAKPYGVAKAASENSGTHSPLSHSSSSLSPETNGFNSFSASRMAENGSGHGP
LNGHHKVNGFKHSDKASDSPASESSISDTNSLDSQSVLSSKSEGLLSPSPSMEKAKPLTD
PLTQHVSHPATTPSADTQAMANSVEVSPSTQATLTEASSDVKTMTKSTLSSYSASQQVTD
ELASLDIPKMEAKTVSVANGKEDMKPCQSGNHSTWEGKRPAEHQEHDGDLNQPLVSTATK
DTNRDKGNHRHYRELKNRSRERYSRWPERENYPHMEHFRSRYSDRHVNSRRDHNYNRGRE
ERLYDWQWDRKPQSSHRSSSHSYKELAWCHARRNSRNRWNYNGEQSSNRAKPSSPRSTSP
LPQPRKRSLSGDDSMSEERRVKKSKKSKKKNKDKHRSLERDVSDKNQDNSSSRHKKKKKK
KRRHEAEDRSHRERQSTLSSDKRDWKGRNGEERRSHKHQHSSDRDSSSHHAKKLCTGDLH
QLNGHSGNGVNHYNGYVQGFFHKEMDAQARYRDLNRTTSNNSGKMFLCGGETGETGPVPC
R
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgactatagttgacaaagcttcagagaaatctgactttgagtcagcgcagtccaagcac
tccggctccctgactcctgtttcctctggagacgtggctgacggcagctccaattggagt
gttgactcttctacagctgagtgttccagggtcatggctacttgtgtggctcccagcctt
gaagtcacggtgtacggaggcaccacagcacttcctgctgggaggccaaatgagcaagtg
gccatgaattgtggtgatggcatcacactgccccagaagatcttgtttccatcagagcgt
ctcagcttgaaatggacccaagtccatcgtattggagcaggtctccagaacctgggcaac
acgtgttttctgaattcagctcttcagtgtctttcatacactgcacctcttgccaactac
atgctgtccagagagcattccaaaacatgtcacgagtctggattttgcatgctgtgtacc
atgcagaatcacatcatccaggtgtttgctaattcggggaatgccattaagccccttggc
gtgctgcatgaactaaaacggattgcaaagcatttccggtgtgggaatcaggaggatgcc
catgagttcctgcagtacacagtggatgctatgcaaaagtcctgcctgcctactaataaa
ttggacaggcaaacgcaggccactactctgatccatcagatatttggaggatatttgcgg
tccagagtgaagtgtatgaactgcaaagcagtatccgacacatttgatccttatttggat
attgctctggacatcaagaatgctccaaatattaccaaggctcttgagctgtttgttaag
gctgagcagttggattgggagaatgcctacaagtgcagcacgtgtaaggaaatggttcaa
gccacaaaaaggctaagcattcaccgcaactccaatgtgcttaccatctctctgaagcgc
tttgccaacttcaacggaggcaaaatttctaaggatgtgagatactctgagtatcttgac
ttgcggccctacatgtctcagtctcacggagacccgcagatttacgggctgtatgctgtg
ctggtgcattcaggcttcagctgctacgcgggacactactactgctacgtgaaggcaagt
aatggccagtggtatcagatgaatgattcatcagtgactcccactgatatacgatctgtg
ctgaaccaacaagcatacctgctgttctacatcaagcaagggtccacagatctgaaaaat
ggagatttgaaccagatgggtttgactccaggccactcatctcaccggccagttgtaaca
cccaagctaaatggacattctcatacctcctcatccatcattggtccacagctccctcct
cacatgttaaagagtaactcgcacgtcaatggcaacggttcctcgaaggagtatcacagt
gggtcaaagcccagcagcagcgacatcagcggagtgaacaaagccacctccagtttgact
tactgttcctccaccacttcatcctctgcttctcatcaacccgtccaccccacaagcatc
ccagagccacagaagaggcccaagatgagctttcttgttggctccggaaaggtggtgcgg
ggcaaccgggccccatcatcctccagcagctcttcatcgtcagacagctattcttaccca
cagtcttcgtcctctacctcaaaattccagcactccaagcaggtcaatggcacatcctcg
tatcacagtgctacttttttggttccctatgatgaggaatcatctgaggagtctgatcag
gagagcagagtcttggacagtggtactgctaagccttatggtgttgccaaggcagccagt
gagaacagtggcacgcacagccccctctctcatagttcaagctcactctcacctgagaca
aatggatttaacagcttttcagcgtctcgcatggctgaaaacgggtcaggacacggcccc
ctgaatggccatcacaaagtcaacggctttaaacattctgacaaggcatcagacagtcca
gcctctgaatcttccataagcgacacgaacagtttggactcccagagtgtgctaagctca
aagtccgagggcctcctctccccatcaccctccatggaaaaggcgaaaccactcactgac
cctctcactcagcatgtctcacacccagcaactacacctagcgcagacacccaggcaatg
gctaactcggtagaagtgagccctagcacgcaggcgaccttaacagaggcgtcaagtgac
gtgaagaccatgacaaagtccaccctgagcagttacagtgccagccagcaggtcactgat
gaacttgcatcactagatatacccaagatggaggcaaagaccgtcagtgttgcaaatggg
aaagaagacatgaaaccgtgtcagtcaggcaatcacagcacttgggaaggaaaaagaccg
gctgagcaccaagagcatgatggcgatttaaaccagccacttgtttctactgccacaaag
gacaccaatagagacaaggggaaccatcgccactacagagagctcaagaacaggagcaga
gaacgttatagccgttggccagagagagagaattatccacatatggagcacttccgcagt
cgctacagcgacagacatgtgaacagccgccgagaccacaactacaacagaggccgagag
gagcgtttatacgattggcagtgggacaggaaaccccaatcctcgcaccgctcttcaagc
cacagttataaagagctggcatggtgccatgcacgcagaaacagtcgtaataggtggaac
tacaatggagagcagagcagcaatagagcaaagccctcgtctccacgttccaccagcccc
ttgccccagcccagaaaacgcagtttgtcaggtgatgacagcatgtctgaggagcgccgg
gtcaagaaatccaaaaaatcaaagaagaagaataaagataagcacaggagtttagaaagg
gatgtgtctgacaagaaccaggacaacagttcctcccgacacaaaaagaagaaaaagaag
aagaggaggcatgaggcagaggacagatctcacagagagaggcagtcaaccctcagctca
gacaagcgtgattggaaaggcaggaatggtgaggagaggaggagccataagcaccagcac
agctctgaccgagacagttcttctcaccatgccaaaaagttatgcactggggaccttcac
caactcaatggtcattcaggtaatggtgtaaaccattacaatggatatgtgcaaggattc
tttcataaagaaatggatgcacaggccagatacagagacttgaaccgtactacttctaac
aacagtgggaagatgttcttatgtggaggagaaaccggagagacaggccctgtgccatgc
agataa
DBGET
integrated database retrieval system
