Neoarius graeffei (lesser salmon catfish): 132898353
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Entry
132898353 CDS
T10798
Symbol
myo1d
Name
(RefSeq) unconventional myosin-Id
KO
K10356
myosin I
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
132898353 (myo1d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngra01009
]
132898353 (myo1d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132898353 (myo1d)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132898353 (myo1d)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ngra04812
]
132898353 (myo1d)
04147 Exosome [BR:
ngra04147
]
132898353 (myo1d)
Protein phosphatases and associated proteins [BR:
ngra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132898353 (myo1d)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Phagocytosis
Others
132898353 (myo1d)
Others
Actin-binding proteins
Myosins
132898353 (myo1d)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
132898353 (myo1d)
Cytoskeleton proteins [BR:
ngra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
132898353 (myo1d)
Exosome [BR:
ngra04147
]
Exosomal proteins
Proteins found in most exosomes
132898353 (myo1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
Zeta_toxin
Sigma54_activat
AAA_22
IQ
NPHP3_N
TsaE
AAA_16
AAA_18
Motif
Other DBs
NCBI-GeneID:
132898353
NCBI-ProteinID:
XP_060795875
LinkDB
All DBs
Position
14:complement(48973368..49124330)
Genome browser
AA seq
1004 aa
AA seq
DB search
MAEHESLEFGKADFVLLDNVSLEEFLANLKLRFEKGRIYSYIGEVVVSVNPYRSMNIYGR
DAVEQYKGRELYERPPHLFAIADAAYKAMKRRNKDTCIVISGESGAGKTEASKYIMQYIA
AITNPSQRAEVERVKNMLLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGH
ISNYLLEKSRVIFQQEGERSFHSFYQLVKGAPESLLRSLHIQKDPIAYNYIKVGGHTKSS
INDSADFKAVADAMKVIGFTTDEIQTVYKILATILHLGNLKFGSDGDVTLIENSKLVAVL
GDLLSTKEENVEKALLYRTVSTGRDVIDKQHTDKEASYGRDALAKAIYERLFCWIVGRIN
DIIEVKNYDIKIHGKNTVIGVLDIYGFEIFQNNSFEQFCINYCNEKLQQLFIQLVLKQEQ
EEYQREGIPWKHIDYFNNQIIVDLVEQQHKGIFAVLDEACMNVGKVTDEMFLQALNGKLA
KHAHYTSRKLSPTDKSLEFDRDFRIRHYAGDVVYSVVGFIDKNKDTLFQDFKRLLYNSSN
PVLKAMWPEGKLRITEVTKRPLTAATLFKNSMISLVENLASKEPYYVRCIKPNEVKSPLL
FEYERCKHQVEYLGLLENVRVRRAGFANRQTYPRFLQRYKMISEFTWPNHDLPSDQEAVK
RLLQGCGFEHDVAYGKTKVFIRTPRTIFSLEEQRAHMVQRIVLFLQKVWRGTIARMRYRR
MRAALIILRAYQRYKVKSYIREVHRRFQNVRSMKDHGKHVKWPTPPKVLRRFEEALRNIY
NRWWAWTLIKILSPEEMLQVRAKVATLECLKGQRADLGLQRAWEGNYLNRDSPETASSFT
LVSSDLQRKDKFMRILFSCNVRKINRFNKAENRAVLITDRHLYKMDPLKQYRPMKSIPLY
NVTGVSVSPGKDQLVVFHTKDNRDLIVCLQGMVPAGESRIGELVGTLLSHFKSEKRKLQV
NIVSPIQCSMNGRKCTIVVETKINQSQPDFTKSRSGYILAVPGN
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacacgaaagtttggagtttggaaaggcggattttgttcttctggataatgtg
tctttggaagagtttctggccaaccttaagctcaggtttgaaaagggtcgcatctacagc
tacatcggtgaggtggtggtatcagtcaacccttaccgttccatgaacatctacggacgg
gacgcagtggagcagtacaaaggccgagagctgtacgagcgcccacctcatctctttgcc
atagcagatgctgcctacaaagccatgaagagacgaaataaagacacctgtattgttatc
tcaggggagagtggagccggaaaaacagaagccagtaaatacataatgcaatatattgct
gctattacaaatcctagccaaagagcagaggtggagagagtgaaaaacatgctgctgaaa
tccaactgtgtcctggaggcttttggaaatgccaagaccaaccgcaacgataattctagc
cgcttcggaaaatacatggatatcaacttcgactttaaaggagacccaattggtggccat
atcagtaactacctgctagaaaagtctagagtgatcttccagcaagaaggagagagaagt
tttcactctttctaccagcttgtgaaaggcgccccagagtctctgctgcgatccctgcat
atccagaaagaccctatcgcttataattatattaaagttggaggacataccaagtcctcc
atcaatgacagtgcggatttcaaagctgtagcagatgccatgaaggtgattggtttcacc
acagatgagatccagactgtctacaagatccttgctaccatcctgcacctgggcaactta
aagtttggcagtgacggcgacgtgactctgatcgagaactcgaaattggtggccgtgctt
ggggatttgctatcaactaaagaggagaatgtggaaaaggcactgctctaccgcactgtg
tcaaccggccgtgatgtcattgacaagcagcacacagacaaagaggccagttacggccgg
gacgctctggctaaggccatttatgagcgcctcttctgctggattgtgggaagaattaat
gacatcattgaagtaaagaactatgatatcaaaatccatgggaagaacacggtgattggg
gtgctggacatctatggctttgagatctttcagaacaacagttttgagcagttctgtata
aattactgcaatgagaaacttcagcagctcttcattcagctggtgctcaagcaagagcag
gaggagtaccagcgagagggcatcccatggaagcatattgattacttcaataatcagatc
attgtggacctagtggaacagcagcacaaggggatcttcgccgtgctggacgaggcatgt
atgaatgttgggaaagtgactgatgagatgttcctacaggcgctcaacggcaaactggca
aagcacgcccattacaccagccgtaagctctcccccactgacaagagcctagagtttgac
cgagactttcgcattcgtcactatgccggtgatgtggtctactctgtggtgggtttcatc
gacaagaacaaggacaccctttttcaggacttcaagaggctgttgtacaacagctcgaac
ccggttctaaaggccatgtggcccgagggtaaactgagaatcaccgaggtcaccaagcgt
cccctcacagcagccactctcttcaaaaactccatgatctcactggtggagaacttggcc
tctaaggaaccgtactatgtgcgctgcatcaaacccaatgaagtgaagtccccactgctg
tttgagtacgagcgctgtaagcaccaggtagagtacttgggcttattggagaacgtccgt
gtgcgtcgtgctggctttgctaaccgtcaaacctaccctcgcttcttacagaggtataag
atgatctctgagtttacgtggccaaaccatgacctgccctcagatcaggaggcagtgaaa
cgtctgctgcaagggtgtggctttgagcatgatgtggcttatggcaagaccaaggtattc
atccggacaccacgcaccatcttcagtctggaggagcaaagagctcacatggtgcagagg
attgtcctctttctgcagaaggtatggcgtggcactattgctaggatgcgttaccggcgc
atgcgggctgcactcatcattctgcgagcataccagcgttataaggtcaagtcctatatc
cgagaggtacatcggcgcttccaaaatgtacgcagcatgaaggaccatggcaagcatgtg
aagtggcccacacctcccaaagtactgcgcaggttcgaggaagctctaagaaacatctac
aacaggtggtgggcctggaccctaattaaaatcctgtctccagaggagatgttacaggtc
agggctaaagtggccacactagagtgcctgaagggtcaaagggcagacctcggcctgcag
agagcctgggagggcaattacctgaatcgggacagtcctgaaacagcatcttccttcacc
ttggtgtccagtgacctgcagaggaaagataagttcatgagaattctcttctcctgcaac
gttcgcaagatcaaccgcttcaataaggcagagaaccgggcagtgctgatcactgatcgt
cacctctacaagatggatccactgaaacagtacaggcccatgaagagcatcccactgtac
aatgtgacgggtgtgagtgtgtccccagggaaggaccagctggtagtcttccacaccaag
gacaaccgggacctgatcgtgtgcctgcagggcatggtgccagcaggcgagagccgcatc
ggtgagctggttggcaccctgctcagccatttcaaaagtgagaagaggaagctccaggtg
aatattgtaagccccattcagtgcagtatgaatggtcgaaagtgtaccatcgtggtggag
accaaaatcaaccaatcacaacctgacttcaccaagagccgatcaggctacatacttgca
gtgccaggcaactaa
DBGET
integrated database retrieval system
