Neoarius graeffei (lesser salmon catfish): 132898366
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Entry
132898366 CDS
T10798
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132898366 (rnf40)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132898366 (rnf40)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
132898366 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
BRE1
CC_Bre1
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
SpoIIE
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
132898366
NCBI-ProteinID:
XP_060795895
LinkDB
All DBs
Position
14:49641639..49673241
Genome browser
AA seq
1000 aa
AA seq
DB search
MSGTGGKRASGGDSPPGPPEKKMKKEEKTTTTLIEPIRIGGVSSTEEMDMKVIQFKNKKL
FERLEQRQAIEDELREKIEKLEKRQATDDATLLIVNRYWTQLEENVQVLLQRVEVKAGPV
PAQAPVSPPTSASAPDPATTPLPAPDIPAAPLPTPLEGEDGLPQPPPPADEEQQQQQQQS
EQLHLQEQSDAAEKPPEEPVVDGIAAPPPPLRESAKAFLSTLDNSSEEELSLQLQDRMQF
SKGAVACIVCIFDRLHSSIEDLCTRTQAAVCEDDSQREVIATNRSLLEENNKLQDLASSL
QGRHHKMSLEYNELVDKVTSSETKVSEMETAVEDLQWDIEKLRKREQKLNKHLAEALEQL
NSGYHASGRSGGLPGGQITLNIQKFESLNAELEQNQELANSRMAELEKLQQELQEAVRES
EKLKMDLRNLPEEVVKETPEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQI
EHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLI
SSLQNHNHQLKGDVQRYKRKLRETQAEINKIKCQSGDNGSMLTLEESVNDGGLDVKKEEE
DDQDEEEERRRELERQRAREREREAERERERERERERQRSEELKRKDSDTLKMLRTELKK
AQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRQRVRELEERERKESKKL
ADEDALRKLRVAEETIEHLQKKLTATKQEEEALLSEMDVTGQAFEDMQEQNSRLMQQLRE
KDDANFKLMSERIKSNQIYKLLREEKEELADQVLTFKTQVDAQLLVVQKLEEKEGILQSS
LATLEKELALRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLREIQASVLENRSARERE
SGNLKRAQEDLSRLRRKLEKQKKVEMYTDADEILQEEINQYKAKLRCPCCNTRDKETVLT
KCFHVFCYECLKTRYDTRQRKCPKCNAAFGANDFHRIYIT
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaccggaggtaagcgagcctctggaggggacagtcctccggggcccccagaa
aagaagatgaagaaagaggagaaaaccacgaccactctgatcgaacctattcgcattgga
ggtgtttcttctacagaggaaatggacatgaaggtcattcagtttaagaacaagaagctc
tttgagcgcctcgagcagaggcaggctatcgaagatgagctgagagagaaaattgagaag
ctggaaaaaagacaggcaactgatgatgccacgctgcttatcgtcaaccgctactggact
cagctggaagaaaatgttcaagtgttactgcagcgagttgaagttaaggctggtccagtg
cctgcacaggcccctgttagtcctccaacatctgcctctgcccctgatcctgcaactacc
cctttgcctgcccctgatattccagctgctcctctgccaactccgctggaaggagaagat
ggccttcctcagcctccacctccagcagatgaggaacaacagcagcagcagcaacagtct
gaacaactccacctgcaggagcaatctgacgcagccgagaagccgcctgaggagccagta
gtggacgggattgctgcccctcctcccccattgagggaaagtgcgaaggctttcctctcc
actttggataacagcagtgaagaggagctcagcctgcagctacaggacaggatgcagttc
agcaaaggtgcagtggcctgcatcgtctgcatctttgaccgcctgcacagcagcattgaa
gatctgtgtacccgtactcaagcagcagtatgtgaagatgacagtcaacgagaagtcatt
gccacaaatcgcagtctactagaggagaataataaactacaagatcttgcgtcctcactg
caaggaagacaccacaaaatgtcactggagtataatgaattggttgataaagtgaccagc
tctgagacaaaagtgtctgagatggagacagctgtggaggacctgcagtgggacatcgag
aaacttcgcaagagagagcagaagctcaataagcacctagcagaagcgcttgaacagctg
aattcaggctaccatgcttctggcaggtctggtggcctacctggtggtcagattactctc
aacatacagaagttcgagtcactaaacgcagagctggagcagaaccaggagctggccaat
agccgcatggcagagctcgagaaactgcagcaggagttacaggaggcagtgcgggaaagt
gagaaactcaagatggacctccgaaaccttccagaggaggtggtgaaagaaacaccggag
tacaaatgtctccagtctcagttctctttgttgtataatgagtctctgggagtgaagact
cagctggacgaggcccgggctctgctgcttacagccaaaaatgctcacttgcgccagata
gagcacatggagagtgatgagttgtctcttcagaagaagttgcgaactgaggtcatccag
ttagaagacacattagctcaagtgcgcaaggagtacgagatgctacggattgagtttgaa
cagaaccttgcagccaatgagcaagcaggccccataaacagagaaatgagacacctaatc
agcagccttcagaaccacaaccaccaactcaagggggatgtgcagagatacaagaggaaa
ttacgtgaaacccaagcagagatcaacaagataaagtgccagagtggagacaatggaagt
atgctgactttggaggagagtgtgaatgatggaggactggatgtgaaaaaggaggaagag
gatgaccaagatgaggaggaggaaaggaggagagagctggagaggcagcgagccagagaa
cgtgagagagaggcagaaagggagagagagcgggagcgagaacgggaaaggcagcgcagt
gaggagctgaagagaaaagactcggacacgctgaagatgctccgaacagagctcaagaaa
gcacaggagtctcagaaggagatgaagctgctgttagatatgtacaagtctgctccaaaa
gagcagagggacaaagtgcagctcatggcagctgaacggaaatcaaaagcagaggtggat
gagttgaggcagcgggtgcgagagctggaggagagagagaggaaggagagtaagaagctg
gctgatgaagatgctctgaggaagcttcgagtggcagaggagaccattgaacatctgcaa
aagaagctcactgccactaagcaggaagaggaagccttgctaagtgagatggacgtgacg
ggtcaggcttttgaggacatgcaggaacagaatagtcgtttaatgcagcagctgcgtgag
aaagatgatgccaacttcaaactgatgagtgagaggatcaaatccaaccagatctacaaa
ctgctgagagaggagaaagaagaactagccgaccaggtgctcactttcaaaacccaggtt
gatgctcagttgctggttgtgcaaaagctggaggaaaaggagggcatcctacaaagctca
ctggctactctggagaaagagttagcattacgcacacaagctctagaactcaataagcgt
aaagctgtagaagcagctcagctggctgaagacttaaaggtgcagctggagcacactcag
gccaagctgagggagatccaggcctcagtgctggaaaaccgcagtgcacgtgaaagggag
agtggcaacctcaaacgtgcacaggaggacttgtcaagactacgccgaaagctggagaaa
cagaagaaggtggagatgtatactgatgcagatgagatcctgcaagaagaaattaatcag
tataaggctaagctgcgttgcccctgctgtaatacccgggataaggagactgtgcttaca
aagtgtttccatgtcttctgttacgagtgcttgaagacccgctatgacactcgacagagg
aaatgtcccaagtgcaacgctgcttttggagccaatgacttccatcgcatttacatcact
taa
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