Neoarius graeffei (lesser salmon catfish): 132898377
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Entry
132898377 CDS
T10798
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132898377 (trub1)
Enzymes [BR:
ngra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
132898377 (trub1)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132898377 (trub1)
Prokaryotic type
132898377 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
132898377
NCBI-ProteinID:
XP_060795905
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All DBs
Position
14:complement(51059437..51066567)
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AA seq
304 aa
AA seq
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MTANSMAAVNNVSLVTLQSLNGMFAIYKKVGPTSTEVLNTLKQRLLKEAGVDKPNSRKRK
KQVIKLGHGGTLDSAASGVLVVGIGEGTKMLTSMLAGSKKYTAVGELGKSTDTFDATGNV
VREESYDHITREAFEEKLKQFTGEIMQVPPLYSALKKDGKRLSTLLKEGVEVEAKPARPV
TVYNLSLQDFNPPLFTLDVECGGGFYVRSLVDDLGTALSSCAHVRELTRTKQGQFTLHEH
VLREERWTFQDISEVLQPCSKPAAVHKKSKRQDVASQLSSECPAKDLHHSKPDNVGEDHK
HSSD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgaacagcatggctgcagtaaacaatgttagtttagtaacgttacaatcttta
aatggcatgtttgccatatacaagaaagtgggaccgacatctacagaagtgttaaacacg
ctgaaacaaaggctgctgaaagaggctggtgtagataaaccaaactctcgaaaaaggaag
aagcaggttatcaaactgggccatggtgggactctggacagcgctgcttctggtgtactg
gtggttgggattggggaagggacgaagatgctcacctctatgcttgctggatcaaagaaa
tatacagctgtcggagagctgggcaaatcaacagacacctttgatgctacaggaaatgtt
gttcgagaggaaagctatgatcacataacaagagaggcttttgaagagaagctgaagcaa
ttcactggtgaaatcatgcaggtgccccctctgtactcagcactgaagaaagatggcaag
cgcctttccaccttgttgaaggaaggcgttgaagtggaagctaagcctgcacgcccagtt
acagtttacaacctctccttacaagactttaatcccccgcttttcactttggatgttgaa
tgcggtggagggttttatgtcagaagtctagtggatgatctgggaacagcgctgtcctcg
tgtgctcatgtgcgggagctgacccggacaaagcagggtcagtttactctccatgaacat
gtgttaagggaggagcgttggaccttccaggacatttctgaggtattacagccctgctca
aagcctgcagctgtgcacaaaaaaagcaaaaggcaggacgtggcctcgcagctcagctct
gaatgtcctgctaaagatctccatcacagcaaacctgataatgttggtgaagaccataaa
cacagcagtgattaa
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