Neoarius graeffei (lesser salmon catfish): 132898396
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Entry
132898396 CDS
T10798
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
132898396 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132898396 (vti1a)
Membrane trafficking [BR:
ngra04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
132898396 (vti1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Laminin_II
Sec20
Sec8_N
CAP59_mtransfer
DUF1664
DUF6097
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
132898396
NCBI-ProteinID:
XP_060795933
LinkDB
All DBs
Position
14:51921554..52124387
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AA seq
224 aa
AA seq
DB search
MSSDFEAYEQEFGTLTAEITNKIGRIPKLSGEDKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRAMYNSRLKSYKQEVEKLEKDFKRSRIAYSDEVRNELLGDDGSSSESQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEILSNLHSDREKIQRSRDRLRETDAN
LGKSSRVLSGMLRRVIQNRILVFILGAILLLTIILAIYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggattttgaagcatatgagcaggagtttggtactctcaccgcggaaattacc
aacaaaattggaagaatacctaaacttagtggagaggacaagacgcagctggttctaaat
gtcgacaaacagctcgaggaagtcagagagttgttggagcagatggacctggaggtgcga
gagatccccatccagagcagagcgatgtacaacagccgactgaagagctataaacaggag
gtggagaagctcgagaaggactttaaaaggtcacgtattgcctacagtgatgaggtgcgg
aacgagctcctgggggatgatgggagctcctcagagagtcagttgataaagttacgtgaa
gagagagcacatctgttggacaacacagagaggctggaaaggtcatctcggagactggag
gctggctaccagatagcagtggaaaccgaacaaattggccaggagattctatccaatctg
cacagtgaccgtgagaagatccagagatccagagaccggttgagagagactgatgcgaac
ttgggcaagagctcccgtgtcctgtcgggcatgctgagaagggtcattcagaaccgcatc
ctggtcttcatcctgggcgccatcctcctcctcaccatcatcctggccatctatttcaat
ctgcgaggccactga
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