Neoarius graeffei (lesser salmon catfish): 132898489
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Entry
132898489 CDS
T10798
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132898489
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Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
132898489
NCBI-ProteinID:
XP_060796125
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Position
14:complement(57838550..57850207)
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AA seq
628 aa
AA seq
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MVSMQVPVCLVDNGPDGKMTVQQGALQILEQIQQPVVVVAVVGLYRTGKSYLMNCLAGQQ
TGFALGSTIESKTKGIWMWCVPHPKKKDHTLVLLDTEGLGDVDKGDSKHDTQIFSLAVLL
SSTLVYNSRGTIDNRAVEELQYVTELAEYIKVKSSDEEGEDSEFVKFFPTFIWAVRDFTL
ERKIDGKDATEDEYLDFALQLKPGNGKKVNDYNLPRECIRKYFPSRKCFTFPFPTNPDSV
KRMESLSMSELDSEFLEVTQRFCTFIFEHSPAKLLKDGHSVDGRVFGHLVSLYVDTMVKG
GVPCLENAVLAMAQIENEAAVREGRQVYEDGMGKLKSRFPVLLGDLTEEHQRLNRLAIEA
FMKRSFKDDDGAFMGSLEESINRIFTSFVQQNEQASVHMCGEILDGLSEGLRSKLKQGVY
TTMGGYQLFSQDLEEVVTKYKQQTQGAVKAEEVLQGFLKQRKEESAAILQADESLSKKEK
ELCEGRERQVLMQQEVCAAQEKQRHMEEKMEAERKSGEEHMRQLKIKMEEDMRNQQEENQ
RAMDARLREQAQLLEKGFQDKADKMSREMEESRRRAEEAGAARNKEFAAMMESMQRKHEQ
SMNMMQQQLELTRQMAANSRGGDGCCIL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggtatcaatgcaagtgccagtgtgtctggtggacaatgggccagatgggaaaatgact
gtccagcagggggcgctgcagatcctggagcagatccagcagccagtggtggtggtggcc
gtggtggggctctaccgcacggggaagtcctacctcatgaactgcctggccggacaacag
acaggctttgccctgggcagcaccatcgagtccaaaaccaaaggaatatggatgtggtgt
gtacctcacccaaaaaagaaagatcacactctggtgctgctggacactgagggactgggg
gacgtggacaagggcgactccaagcacgacacccagatcttctctctggctgttctgctg
agcagcactctggtctacaacagcagaggcaccatcgacaacagagcagtggaggaactg
cagtacgtcacagaactggctgaatacatcaaagtgaagtcatctgatgaagagggagaa
gactctgagtttgtcaagtttttccccacgttcatctgggctgtgagagacttcactctg
gagagaaagatcgatgggaaagatgcgacggaggatgaatacctagactttgccctgcag
ctgaaacctggtaacggtaaaaaagtgaacgattacaatcttcctcgagagtgcatccgg
aagtacttcccgtcccgtaagtgcttcaccttcccattcccaaccaacccggacagtgtg
aagcgcatggagtccctgtcaatgtccgagctggactcggagtttctggaggtcacccag
cgcttctgcactttcatatttgagcacagcccagccaagctactcaaggatggacactcc
gtagacggcagagtctttggccacctggtgagtttgtacgtggacactatggtgaagggg
ggcgttccctgtctggagaacgctgtgcttgccatggcgcagatcgagaacgaggcggcg
gtgcgtgagggccggcaggtgtacgaggacggcatgggcaaactgaagagccgcttcccc
gtcctgctgggcgacctcaccgaggagcaccagcgtctcaaccgcctcgccatcgaagcc
ttcatgaagcgctccttcaaagacgacgacggcgcgttcatgggctcactggaggagtcc
atcaaccgtatattcactagcttcgtgcaacagaatgagcaggcatcagtgcatatgtgt
ggggagatcctggatggtctgtctgagggactcaggagcaaactgaaacagggagtctac
accaccatggggggctaccagctctttagccaggacctggaggaagttgtcacgaagtac
aagcaacagacccaaggagctgtcaaggctgaggaggtgctgcagggcttcctgaaacag
aggaaggaggagtctgctgccatcctgcaggccgacgagagcctgagcaagaaggagaag
gagctctgcgaggggcgcgagcgtcaggtactgatgcagcaggaagtctgtgctgctcag
gagaaacagcgccacatggaggagaagatggaggctgagaggaagagtggagaggagcac
atgaggcagctgaagatcaagatggaggaggacatgaggaaccagcaggaggagaaccag
cgcgccatggacgccagactacgagagcaggctcagctgctggagaaggggttccaggac
aaggcagacaagatgagccgggagatggaggagagcaggaggcgggcggaggaggctggt
gctgctcgcaataaggagttcgccgccatgatggagtccatgcagcgcaaacacgaacag
tccatgaacatgatgcaacagcagctggaactgaccaggcagatggcagccaatagcaga
gggggagatggctgctgcatcctctaa
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