Neoarius graeffei (lesser salmon catfish): 132898959
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Entry
132898959 CDS
T10798
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132898959 (lingo3a)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
132898959 (lingo3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
Ig_3
LRR_4
ig
Ig_2
LRRNT
LRR_LRWD1
V-set
Motif
Other DBs
NCBI-GeneID:
132898959
NCBI-ProteinID:
XP_060796605
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All DBs
Position
15:70717814..70719628
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AA seq
604 aa
AA seq
DB search
MAGYPGLGLMGLILLQITAPICHGQGCPHVCDCVPQRKSVNCQNKHLNSFPNGIPTDTKL
LDLSRNKLRWVEHGDLEAYTHLEDLDLTENLISVLEPSTFSSLLNLRVLRLRANQLKLVP
MGAFSHLANLTVLDLSGNKLVILVDFTFQDLRRLQKLEVGDNDLVYISNKAFLGLIGLRE
LTIEKCNLTSISGHALSYLRGLVSLRLRYLNIVSLEEQNFYKLGGLRGLEIDHWPFLEYI
SPYSFQGLDLSWLFITNTNITTVPTGALRNLIHLDNLNLSHNPISVLESWALRDLINLKD
LHLVGTNLMCVQPYGLGGLQQIRLLNLSNNRLVTLEEGAFHSVNTLEMLRVDGNPLSCDC
RLLWILQRRKTLNFDGKFPVCAGPIQVQGKALSAFSDSALIDHFTCQRPKIRNRKLQQLS
AREGQVVSFFCQADGEPTPTIFWISPQRRRITTRSTGRLIVLPEGTLEIHYVQVTDSGTY
ICIASNAGGNDTYFATLTVSGIPLDAGLSANRTYVGDLDATNLNDTHVFLKFTLDLKTIL
VSTAMGCITFLGVVIFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPASSGGHGGARKFN
MKMI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctatcctggcttgggcttgatgggacttatattgctacagattacagctccc
atatgccatggccaaggttgtccacatgtctgtgactgtgtaccccagaggaagtctgta
aattgtcagaacaagcacctgaattcttttccaaatggaattccaactgacacgaagttg
ctagacctgagtagaaataagttacggtgggtggaacatggcgacttggaagcctacaca
catttggaggatttggatcttactgagaatcttatcagtgtgcttgagcccagtactttt
tccagtttactgaatctacgtgtgttacgcctacgtgccaaccagttgaagctggtgcca
atgggtgccttctcacatcttgccaatctcacagttttggacttgagtggaaataaattg
gttatattggtggattttactttccaggatctgcggaggctccaaaaattagaggtcggt
gacaatgatttggtgtatatatcaaacaaggcattcttgggtttgattggtctacgggaa
cttactattgagaagtgcaacctgacttctatctcaggacatgctctttcctatctccgt
ggcttggtgtcactacgactacgctacctcaatattgtctcattagaggaacagaatttt
tataagctgggaggactccgtggtctagaaattgaccactggccatttttagagtacatt
tccccatacagtttccagggcctcgatttatcctggcttttcattaccaacaccaacatt
actacagttccaactggtgcactacgtaatcttatccatttagacaatctgaatctctca
cacaaccccatttctgttcttgaatcttgggctttgcgtgatctgatcaatttgaaggac
ttgcatcttgtgggcaccaacttgatgtgtgtgcagccttatggccttggaggtctgcag
cagatacgtttactcaacctgtcaaacaataggctagtgacactagaagaaggtgctttt
cactctgtaaacaccctggaaatgcttcgggttgatggtaaccctctgtcttgtgactgc
cgtctattatggatcctgcagcgccgcaagacccttaacttcgacggcaagttcccagtt
tgtgcaggacccattcaggtgcaaggtaaagctcttagcgccttctctgactcagcactc
attgaccacttcacatgccaacgaccaaaaatccgcaaccgaaaattacaacagctatct
gcacgtgagggtcaggttgtatcatttttttgccaagcagatggagaaccaactccaacc
atcttctggatttcacctcagcgccgccgcatcactaccagaagcactggtcgtcttata
gtgctgccagagggcacattagaaatccactatgtccaagtaacagatagcggaacctat
atatgcattgccagcaatgcaggtggcaatgacacctactttgccacattaacggtcagt
ggtatacccttggatgcaggtctttcagcaaatcgcacttatgttggtgacctcgatgcc
actaatctgaatgacacgcatgtcttcctaaagttcacgttagacctcaagacaattttg
gtctcaacagcaatgggttgtataacttttttgggtgtagtaatcttctgcttcttgctt
ttgtttgtgtggagtcgtggacgtggacagcacaaaaacaacttttcagtggagtattcc
ttcagaaaggtggatggccctgcaagcagtgggggccacggaggggctcgaaaattcaat
atgaaaatgatatag
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