Neoarius graeffei (lesser salmon catfish): 132899080
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Entry
132899080 CDS
T10798
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132899080 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132899080 (copb1)
Membrane trafficking [BR:
ngra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
132899080 (copb1)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
132899080 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
132899080
NCBI-ProteinID:
XP_060796700
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All DBs
Position
15:410662..448765
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPSDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDSLRALIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENEIKKETGELKMEEEVSAVPVQKLVTEMGTYATQSALSSNRPSKKDEDRP
PLRGFLLDGDFYVAASLATTLTKIALRYIAIVMEKKKQNSFVAEAMLIMATVLHLGKSSL
PKKPITDDDVERISLCLKVLAESSPLMSDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNETSSKEDQFQLSLLAAMGNTQRKEASDPLSSKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITELNEYLQHILSSTNMKCLTPDKALSGVCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEAPVNGHIRIRAKSQGMALSLGDKINLSQKKTSS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcagagaatgtgtgttacaccctgatcaacgtcccgagcgactcggagcct
ccatcagaagtcagccttaaagctgatttagaaaagggagagataaaagccaagacggag
gcgttgaagaaagtcatcatcatgatcctgaatggtgagaagctgcctggtctgctgatg
accatcatccgctttgtgcttcctcttcaggaccataccatcaaaaaactgctgctggtg
ttctgggagattgttcccaaaaccacacctgatggaaaactgcttcaggaaatgatcctg
gtctgtgatgcctacaggaaggaccttcagcaccctaatgagtttatccgtggctccacg
ctgcgcttcctgtgtaagctgaaggaggcggagcttttggagccactgatgccagccatc
cgtgcttgtctggaacatcgccacagctatgtacgccgcaatgccgtccttgccatctac
accatctacaggaattttgaacatttaatccctgatgccccagaactgatccacgacttc
ctcgtaaacgaaaaagatgcgagctgtaaaagaaatgcgttcatgatgctcattcatgct
gatcaggacagagctctggattatctcagcacgtgtattgatcaggttcacacgtttgga
gacattctgcagctggtgattgttgaactgatctacaaggtgtgccatgctaacccatca
gagcgagctcgcttcatccgctgcatctacaacctgctgcagtcgtccagtccagctgtg
aaatatgaagctgctggaactctggttactctgtccagtgcaccgactgccatcaaggct
gcggctcagtgttatattgacctgatcattaaggagagtgataacaacgtgaagctgatt
gtcctggaccgcctcattgagctgaaggaacatcccactcacgagcgtgtgctgcaggac
ctggtgatggacatcctgagggttctgaccactcctgacctggaggtgcgcaagaagacg
ctacagctggcgctggacctggtgtcctctcgtaatgtggaggaattggtcattgtgctg
aagaaggaagtgataaagaccaacaatgtgactgaacacgaggacactgataaataccgc
cagctgttggtgagaactctccactcctgcagtgttcgcttccctgacatggctgctaac
gtcatccctgtgctgatggagttcctcagtgacactaatgaagcagctgctgctgatgtg
ttggagtttgtgcgtgaggcgatacagaggttcgattcgctcagagcgctcatcatcgag
aaaatgctggaagtttttcacgccattaaaactgtcaaaatttatagaggagcgctgtgg
attctgggagagtattgcagtaccaaagaggacatccagagtgtgatgactgaagtgcgt
cggtcgctcggagagatccccatagtggagaatgagataaagaaggagacgggggagctg
aagatggaggaggaggtgagcgctgtgccggtgcagaagctggtgactgagatgggaacc
tacgccactcagagtgccctcagctccaacagaccctcaaagaaagatgaggacaggcct
cctctgaggggtttcctgttggacggggatttctatgtcgctgcatctcttgccaccacg
ctgactaaaatcgcgctgcgctacattgccattgttatggaaaagaagaagcaaaactca
tttgtagctgaagccatgctgatcatggccaccgtgctgcacctggggaaatcctcactg
cccaagaagccaatcactgacgatgatgtggagcgaatctctctgtgcctgaaggttctg
gccgagtcgtcaccgctcatgagtgacatcttcaacaaggagtgccgcaagtccctgtcc
cacatgctgactgtccggctggaggaggagaaactgtcccagaagaaagaatcggagaag
cgtaacgtgactgtgcaggcagacgaccccatctccttcatgcagctcaccgccaagaat
gagacgagctccaaagaggaccagttccagctcagtctgctggctgcgatgggcaacacg
cagaggaaggaagcgtccgatccgctctcctccaaactcaataaggtgacgcagctgact
ggtttctcagatccggtctatgctgaagcgtatgtccacgttaaccagtatgacatcgta
ctggatgtgctggtggtcaatcaaaccagtgacaccctccagaactgcactttggagctg
gccacactgggtgacctgaagctggtggagaagccgtctcctctcactctcgcccctcat
gactttgccaacatcaaagccaacgtcaaagtggcttccacagaaaatggcatcattttt
gggaatatcgtatatgatgtgtccggagcagccagtgacaggaactgtgtggttctcagt
gacatccacattgacatcatggactacatccagccagcctcgtgcacagatgccgagttt
aggcagatgtgggccgagttcgagtgggaaaacaaggttacagtgaacaccaacatcact
gagctgaacgagtatcttcagcacattctcagctccaccaacatgaagtgtttaactcca
gacaaggcgctttctggtgtctgtggtttcatggctgctaacctgtatgcacgctccatc
ttcggtgaggatgctctggctaacgtgagcattgagaagcccatccatctcggacctgag
gctccggtcaacggccacattcgcatccgcgcaaagagtcagggcatggccttgagtctg
ggagataagattaatctgtctcagaagaagaccagctcataa
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