Neoarius graeffei (lesser salmon catfish): 132899163
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Entry
132899163 CDS
T10798
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04517
IgSF CAM signaling
ngra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132899163 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132899163 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ngra04812
]
132899163 (sptbn1)
Cytoskeleton proteins [BR:
ngra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
132899163 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
132899163 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
PMC2NT
PH_11
SOS1_NGEF_PH
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
132899163
NCBI-ProteinID:
XP_060796836
LinkDB
All DBs
Position
15:11519943..11757234
Genome browser
AA seq
2349 aa
AA seq
DB search
MTTVAAEYDHMDIQQQYQDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVVTADNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNVHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVAKELEAENYHDIKRIAARKDNVLRLWDYLLELLKARRQRLEMNLGVQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVNANAQKFAIDDEGY
KPCDPQVIRDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDVGKDLTGALRLLSKHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEAKIRERVAD
VQAQWAALEQLAAVRKARLEEACSLHQFQADADDVDAWMLDALRIVSSDDVGHDEFSTQA
LVKKHKDAAAEVASYRPVIDSLHEQAQALPNELGQSADISGRLAGIEERYKELAELTRLR
KQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLMHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQDLGNDLTGVMALQRKLTGMERDLAAIEAKLGDLNGEAER
LAGEHPEQAKAIKDRLAEIGTVWGELKETLQNREASLGEASKLQQFLRQLDDFQSWLSRT
QTVIASEDMPNTLAEAEKLLAQHEGIKHEIDNYEEDYQKMRDMGEMVTQGQTDAQHMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAETFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINSVVEAGRRLASDGNINAEKIQERATSIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWTNEKMLTAQDMTYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKEGLQLVSEKPETEAVVKEKLTVLQTQWQDLESTTQTKAQCLFDANK
AELFTQSCADLDKWLGSLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVEELQS
QAHILRQEGKDTDEVDVRREVVEKKFQELLDPLQKRKNFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGHNLQTVQMLIKKNQTLQKEIQGHQPRCDDIFERSQSIVTVDSPSVEP
IRVRLGELQDLWKLLIQETQKRHERLEEAHQAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVADNHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNQMADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDVKEILCRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQDDATRLQSAYAGDKADDIQRRESEVLDAWRNLLEACEGRRARLLDTGDKFRFFNMVRD
LMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
KEVGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRRQEEEERKRKPPT
PEPEQEIEAQQREGEQIAQNGLPSDQESPRDGVDREIVNGVPERSSKEPSPIPSPTSGRR
AKGSQSSTLPAKSQESPSAQLEGFLHRKHEYEGHNKKASNRSWHNVYCVINNQEMGFYKD
NKNAGQGIPYHNEIPVSLKDAVCEVAIDYKKKKHVFKLRVTNGNEYLFQAKDDEEMNMWM
QAIQNAVSGSSPSDKSDITPSNQSTPVSSRAHTLPATVTLTTESSPGKREKDKEKDKEKR
FSLFSKKKQ
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgctgaatatgaccacatggacatccagcagcagtaccaggatact
gtcaacaatcgctgggatgaggagtgggacaacgagaacagctcggcccgcctgttcgag
cgctcacgcatcaaggctttagcagatgaacgtgaggcagtgcagaagaaaaccttcaca
aaatgggtcaactcccacctggcacgggtctcctgccgcattacagacctgtacatggac
ctacgggatggacgcatgcttatcaagctcctggaggtgctctctggagagaagctgccc
aaacctacgaagggccgaatgagaatccactgtctggagaatgtggataaagccctgcag
ttcctcaaggagcaacgcgtccacctggagaacatgggctcccatgacatcgtcgacggc
aaccatcgcctcactcttggcctcatctggaccatcatcctccgcttccagatccaagac
atcagcgttgtaacagcagacaataaagagaagcgttcagctaaggacgctctgcttctg
tggtgtcagatgaagacagccggctatccaaacgtcaacatccataacttcaccactagc
tggcgcgacggaatggcgttcaacgccctcattcacaaacacaggccggatcttatcgat
tttgacaagctgaagaagtccaacgttcactacaacctgcagaatgccttcaacttggct
gagcagcacctgggcctcactaaactgctcgaccctgaggatatcagtgtggaccatcct
gatgagaagtcagtcatcacctacgtcgttacatactaccactatttctccaagatgaag
gctctgaaggtggagggaaaacgtattggcaaagtgctcgataacgccattgagacggag
aagatgattgagaaatacgagtctcttgcgtcagaccttctggagtggatcgagcaaacc
atcatcatcctgaacaaccgcaagtttgctaattctctggtcggagtccagcagcagctc
caggccttcaacacataccgcactgttgagaagcctcccaagttcacagagaaagggaac
ctggaagtccttctgttcacaattcagagcaaaatgagagccaacaaccagaaagtctac
atgcccagagagggcaagcttatctccgatatcaacaaggcctgggagcgtctggagaag
gcggagcatgagcgcgagctggccctgaggaacgagctgattcgtcaggagaagctggag
cagctggcacgccgctttgaccgcaaggcggccatgagagaaacctggctcagcgagaat
cagcggctcgtgtcacaggacaactttggcttcgacctccaggcagtggaggcagccacc
aagaagcacgaagccatcgagacggacatcgcagcctacgaggagcgcgtgcaagctgtg
gtggccgtggctaaagagctggaagcagagaactaccatgatatcaagcgcattgcggca
cgtaaggacaacgtcctgcggctctgggactacctactggaactcctgaaggcacgcagg
cagaggctggagatgaatctcggtgtgcagcgtgtcttccaagagatgctctacatcatg
gactggatggatgagatgaagatgctactgctgtctcaggactacgggaagcacttgctg
ggagtggaagatctgcttcagaaacacgctctggtggaggccgatatcgccatccaggcc
gaccgtgtgagggccgtcaacgccaacgcccaaaaattcgccattgatgatgaaggttac
aagccgtgtgatccgcaggtgatccgtgaccgcgtggctcacttggagttctgctaccag
gagctgacccagctggcggctgagcgacgtgcacgtctggaggagtctcgccgtctttgg
aagttcttctgggagatggccgaggaagagggctggatccgtgaaaaggagcagatcctg
tcatcagatgacgtcggcaaagacctgacgggtgccctgcgtttgctgagtaagcatcgg
gcgcttgaggacgagatgagtggtcgagctgggcacctgcagcacacggtgcgtgagggt
caggcgatggctgacgccggacactttggagaagccaagatccgcgagcgcgtggctgat
gtgcaggctcagtgggcagctctggagcaactcgctgcagtccggaaggcacgtctagag
gaggcctgcagtttgcaccagttccaggctgatgctgatgacgtggatgcctggatgctg
gacgcgctgcgtatcgtctcaagtgatgacgtcggccatgacgagttctccacgcaggcg
ctggttaagaagcacaaggatgcagcagctgaggtggccagctaccggcccgtgattgac
tcgctccatgagcaggctcaggccctgcctaacgagctgggccagtcagccgacatcagc
ggacgcctggcaggcatcgaggagcgctataaggagttggcagagctcaccaggctgagg
aaacaggctctgcaggatgcactggctctctataagatgttcagtgaagctgacgcctgc
gaggtgtggattgatgagaaagagcagtggctcaacagcatggagattccagagaaacta
gaggacctggaagttattcagcacaggtttgaaagtctggagcctgagatgaataaccag
gcgtcccgcgtcgctgtggtcaatcagattgcccggcagctgatgcacagtggacacccc
agtgagaaggacatcaaggctcagcaggacaaactgaacaccaggtggagccagttcaga
gacttggtggaccaaaagaaggagtccctgaactcagcactgggtgtccagaactatcac
ctggactgcaacgagaccaagtcatggatccgcgagaagaccaaagtgatcgagtccact
caggacctgggtaatgacctgacaggagtcatggcactgcagcgcaagctgacagggatg
gagcgcgacctggctgccatcgaggccaagctgggtgacctgaatggagaagcagagcgt
ctggcaggtgagcatcctgaacaagccaaggccatcaaggacaggctggcggagatcggt
actgtctggggcgagctgaaggagactctgcaaaaccgtgaggcctctcttggtgaagcc
agcaagctacagcagttcctccgccagctggatgatttccagtcgtggctgtctcgcaca
cagacggtcattgcctctgaggacatgcccaacaccctggctgaggctgagaagcttctc
gcccaacacgaaggcatcaagcatgaaattgacaactatgaagaggactaccagaagatg
cgtgacatgggcgagatggtgacccagggccagacagacgcccagcacatgttcctgagg
cagcggctacaggcactggatactggttggaacgagctgcataagatgtgggagaaccgt
cagaacctcctgtcccagtctcatgcctaccaactgttcctcagagacacgaagcaggcc
gagaccttcctcaacaatcaggagtacgtgttggctcacactgagatgcccaccactcta
gaaggagcagaagctgctattaagaagcaggaggatttcatgaccacgatggatgccaat
gaggagaagatcaacagtgtggtggaggccggacgcagactggccagtgacggaaacatc
aacgctgagaagattcaggagagagcaacttccattgatgacagacataagaagaaccgt
gaggcagcggtggagctcctgatgagacttaaagataacagagacctacagaagttccta
caggactgccaggagctgtctctgtggacaaacgagaagatgctgacggcgcaagacatg
acatacgacgaggccagaaaccttcacagcaagtggctcaagcaccaagccttcatggct
gagctccagtccaacaaagaatggctggataagattgagaaggaagggttgcagctggta
tcggagaagcccgagactgaggccgtggttaaggagaagctgacggtgctgcagacgcag
tggcaggacctggagtccaccacgcagaccaaagcacagtgcctgttcgacgccaacaag
gccgagctgttcacgcagagctgcgctgatctcgataagtggctcggcagcctggagggt
cagatccaatcagacgactacggcaaagatctaaccagcgtcaacatcctgctgaagaaa
caacagatgctggagaaccaggtggaggtgcgtcagagggaggtggaggagcttcagtct
caggctcacatcctgcggcaggagggcaaggacacggacgaggtggacgtgcggcgcgaa
gtggtggagaagaagttccaggagctgctcgatcctcttcagaagaggaagaacttcctc
atggcttccagggagatccatcagttcaaccgtgatgtcgaggacgaaatcctctgggtt
gaggagaggatgcctcttgcgacttcaacagatcacggccacaacttacagactgtccag
atgctcatcaagaagaaccagaccctgcagaaggagatccagggccatcagccgcgctgt
gacgacatcttcgagcgcagccagagcatcgtgacggtggacagcccaagtgttgagccc
atccgagtgcgtctcggcgagctgcaggacctctggaagctcctcatccaggagacacag
aagaggcacgaacggctggaggaggcccaccaggcgcagcagtactactttgacgcagcc
gaagcggaggcttggatgagcgagcaggagctttacatgatgtcggaggagaaagctaag
gatgagcagagctctgtggccatgctgaagaaacaccagatcctcgagcaggcggtggag
gactacgccgagaccgttcatcagctctccaagaccagccgtggtctggtggctgacaat
caccctgagagtgagagaatagggatgcgccagtcgcaggtggataaactgtacgcagga
ctgaaggacctttcggaggaaaggagaggaaaactggatgagaggttccgcctcttccaa
ctgaaccgcgaggtggacgatctggagcagtggatcgctgagagagaagtggtggcagga
tctcacgagttgggccaggactacgagcacgtcactatgctgcaggagcgtttccgtgag
ttcgcccgcgacaccggaaacatcggtcaggaacgtgtggatggtgtaaaccaaatggcc
gacgaactcatcaacgccggccatgctgacgctgcaaccgtcgccgagtggaaggacggg
cttaacgaggcctgggcggatctcctggagctcattgacactcgtacgcagatcctggcg
gcttcctacgagctgcataagttctatcacgacgtcaaggagatcctctgccgcatcctg
gacaagcacaagaagcttccggaagagctcgggcgagaccagaacacagtggagacgctc
cagagaatgcacaccaccttcgaacatgacatacaagcgctggggacgcaggtcaggcag
ctgcaggatgacgcgacacgtttgcagtcagcatatgccggcgataaggctgacgatatt
cagcggagggagagcgaagtcctggacgcatggcggaaccttctggaagcctgtgaaggg
cggagggcgcgtctgctcgacaccggagacaagttccgcttcttcaacatggtgcgtgac
ctcatgctctggatggaggacgtcatccgccttatcgaggcccaggagaagcccagggac
gtgtcctctgtggagctgctcatgaacaaccatcagggcatcaaggccgagatcgatgca
cgtaacgacagcttcaccacctgcatcgagctgggcaagtctctgctggcacgcaaacac
tacgcatcagaggagattaaagaaaagttgctacagttgacggacaagaggaaagaaatg
attgacaagtgggaggacagatgggagtggctaagactgattttggaagtgcaccagttt
tcacgggacgcgggggtcgccgaggcgtggttgctgggtcaggagccatacctgtccagt
aaggaggtggggcagagcgtggatgaggtggagaagttgatcaagaggcacgaggcattc
gagaagtcggccgctacctgggaggaacgcttctctgcgctggagaggctgacgacgctg
gagttactggaagtgagaagaaggcaagaagaagaagagagaaaaagaaaacccccaacg
ccagagccggagcaggagatcgaggcacagcaaagagaaggagagcagatcgctcagaac
ggactgccgtcagatcaggaatccccacgggacggagtggacagagaaattgtgaacggc
gtgcctgagaggagctcaaaggagccaagtcccatcccgtccccaacttcaggcagacgc
gctaaaggcagccaatcatccaccctgccggccaaaagtcaagagtctccctccgcccag
ctggagggcttcctacaccgcaagcatgagtacgagggccacaacaagaaggcatccaac
aggtcctggcataacgtgtactgcgttatcaacaaccaggagatgggcttctacaaagac
aacaagaatgccgggcagggcatcccgtaccacaacgagatccccgtcagcctgaaggac
gccgtctgcgaggtcgccattgactacaagaaaaagaagcacgtcttcaaactgagagtg
acaaacggaaacgagtatctcttccaagccaaagatgatgaggagatgaacatgtggatg
caggctattcagaacgcagtcagcggctcctccccttcggacaagtctgacatcacgcct
agcaaccagagcactcctgtctccagccgcgcccatacactcccagcaaccgtcaccctg
acaaccgagtcaagcccaggcaagcgagagaaggacaaggagaaagacaaagagaagcgt
ttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
