Neoarius graeffei (lesser salmon catfish): 132899173
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Entry
132899173 CDS
T10798
Name
(RefSeq) eukaryotic initiation factor 4A-II isoform X1
KO
K03257
translation initiation factor 4A
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132899173
03012 Translation factors [BR:
ngra03012
]
132899173
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132899173
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132899173
mRNA cycle factors
Stress granule specific factors
132899173
Translation factors [BR:
ngra03012
]
Eukaryotic type
Initiation factors
eIF-4
132899173
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132899173
Exosomal proteins of bladder cancer cells
132899173
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrD-helicase
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
132899173
NCBI-ProteinID:
XP_060796853
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Position
15:12518078..12565310
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AA seq
411 aa
AA seq
DB search
MSSGSADYNSSRDRDHGGPEGMEPDGIIESNWNEITDNFDDMNLKETLLRGIYAYGFEKP
SAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLDLDLKETQAMVLAPTRELAQQ
IQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAYHIVVGTPGRVFDMLNRRFLSPKW
IKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPTEVLEVTKKFMREPVRIL
VKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHAR
DFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNREN
YIHRIGRGGRFGRKGVAINFVTEEDKRILRDIESFYNTTVEEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcggttctgcggattataacagctctagagacagagaccatgggggccctgag
gggatggagcctgatggtatcatcgagagcaactggaatgagattacggacaatttcgac
gatatgaacttaaaggagacgctccttcgcggtatctacgcttatggttttgagaaacca
tcagctatccagcagagggcaatcattccatgcattaaaggttatgacgtcatcgcacag
gctcagtcaggaactggcaagacagccacgttcgccatctccatcctgcagcagttggat
ttggatctgaaggaaacccaagctatggtgctggctcctaccagagagctggcccaacag
atccagaaagtaatcctggcactcggtgactatatgggtgccacatgccacgcctgcatc
ggaggcacgaatgtgcgaaacgagatgcagaagctccaagctgaggcttaccatatagtg
gtcgggaccccgggtcgtgtgtttgacatgttaaacaggaggtttctgtctcctaaatgg
atcaagatgtttgtcttggatgaagccgatgaaatgctgagtcgaggatttaaggatcaa
atctatgaaatttttcagaagctaagcaccaacattcaagtcgtgcttctgtctgccacg
atgcccactgaggttttggaagtgaccaaaaagtttatgcgggagcctgttcgcatcctg
gtgaaaaaagaggagcttactctggagggtatcaagcagttctacatcaacgtagaacga
gaggaatggaagttagacacactgtgtgacctttacgagactctgacaatcacccaggct
gtaatcttcctgaacaccaggaggaaggtggactggctgactgagaagatgcacgctcgg
gacttcaccgtgtctgctttgcacggagacatggaccagaaggaacgcgatgtgattatg
agggagttccggtctggatccagcagggtgctgatcactacggacttgctggctcgcggc
atcgacgtgcagcaagtgtctctcgtcattaactacgatttgcccaccaaccgagaaaac
tacatccacagaattggacgcggcggccgtttcggccggaaaggcgtcgcgattaacttt
gtcacagaggaggacaagaggattcttcgtgacattgagtctttttacaacaccacagtt
gaggagatgcccatgaatgtagctgacctgatctga
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