KEGG   Neoarius graeffei (lesser salmon catfish): 132899337
Entry
132899337         CDS       T10798                                 
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngra03019]
    132899337 (mex3b)
   04121 Ubiquitin system [BR:ngra04121]
    132899337 (mex3b)
Enzymes [BR:ngra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132899337 (mex3b)
Messenger RNA biogenesis [BR:ngra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     132899337 (mex3b)
Ubiquitin system [BR:ngra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132899337 (mex3b)
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-C3HC4 RING_XB3-XBAT31 zf-C3HC4_2 KH_2 Prok-RING_4 KH_DEAH11_2nd zf-RING_5
Other DBs
NCBI-GeneID: 132899337
NCBI-ProteinID: XP_060797103
LinkDB
Position
15:complement(30188275..30193318)
AA seq 535 aa
MPSSLFPELERNGSGSSQGVDALDDQRALQLALDLTLLDLDENPACDNEPRKKSVNMTEC
VPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREIIS
AAEHFSMIRASRNKNSSMNGSGSVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQ
QQTHTYIVTPSRDKEPVFEVTGMPENVDRARDEIEAHIAMRTGAGLIEFASAADDNDFHA
NGTDVGFEMHAASASGHHASLWGKTSASASASATPSLGRKPFASYRNDSSSSLGSASTDS
YFGTNYSPPSPALSYNNNNNNNNLNINGNSFVYGGEIVSPDCADLAFDSSPGFDPAPGLI
WSQYERSMSLTNSATSSSIFPSNASSNANGILANQRRLNGMNCSTQPRLSPPLHHVGGIS
DHPLARRVRSDPGGGSLNFPGYNSMASHLPGLPSDSSASSSSSSSSSSSSSSSSGTSRKG
SRDCSVCFESEVIAALVPCGHNLFCMECANRICERNDPECPVCHAAVTQAIRIFS
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgccgagctccctgttccccgagctggagaggaatggcagcggcagcagccagggggtc
gacgccctggacgaccaaagagctctgcagctcgcgctggacctcaccctgctcgacctg
gacgagaaccccgcgtgcgacaacgagccccggaagaagagcgtgaacatgaccgagtgt
gtgcctgtgcccagctccgagcatgtggccgagatcgtgggcagacaaggttgcaagatt
aaagccctgcgcgccaagaccaacacctacattaagactccggtgcgaggggaggagccc
gtgtttgtagtgacaggcaggagggaggatgtagccatggcgcggagggaaatcatctca
gcagctgagcatttctccatgatccgagcatcacgaaacaaaaacagcagcatgaatggg
agtggtagtgtacctgggccgcccaacctaccaggtcaaactaccatccaggtgcgagtg
ccataccgtgttgtcgggttggtggtgggacccaaaggagccacgatcaagcgcatccaa
cagcagacacacacctatattgtgaccccgagccgagacaaggagcctgtgtttgaggta
acaggcatgccagagaatgtggaccgagcacgtgatgagattgaggcacacatcgctatg
cgcacaggtgctgggctgatcgagttcgccagtgctgctgatgataatgacttccacgcc
aacggcacagatgtgggctttgaaatgcatgcggccagcgccagcggtcatcatgccagc
ctatggggcaaaacaagtgctagtgctagtgccagcgccacacccagccttggacgcaag
ccctttgccagctatcgcaacgacagctccagctctctaggtagcgcctccactgactcg
tactttggcaccaactacagtccgccgagtcctgcactgagctacaacaacaataacaac
aacaacaacctgaacatcaatggcaactcctttgtttacggcggcgagattgtatcacct
gactgtgctgatctcgcattcgattcctcacctggatttgacccggcgcctggtttgatt
tggtctcagtacgaacgtagcatgagcttaacaaatagtgctacatcgtcgtccatattc
ccttccaatgcttcctctaacgctaatgggattctggccaaccagaggcggctgaatggg
atgaactgctccacccagcctcgtttatccccgccccttcatcatgtgggtgggatcagt
gatcatccactagcccggagggtacgcagcgacccaggcggaggctccttaaatttccca
ggctacaacagcatggcttcccatctccctgggttgccctcagattcgtctgcgtcctcc
tcttcttcatcatcttcctcttcctcctcttcctcttcctctggaacgagccgtaaaggc
agccgggactgttccgtgtgcttcgagagcgaggtgatcgccgcccttgtgccatgtggc
cataacctcttctgcatggaatgtgccaaccgcatttgcgagcgcaatgaccctgaatgc
cccgtctgccacgctgcagttactcaggcaatacgtatattttcgtaa

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