Neoarius graeffei (lesser salmon catfish): 132899338
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Entry
132899338 CDS
T10798
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132899338 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngra03009
]
132899338 (efl1)
Ribosome biogenesis [BR:
ngra03009
]
Eukaryotic type
Pre-60S particles
GTPases
132899338 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
132899338
NCBI-ProteinID:
XP_060797104
LinkDB
All DBs
Position
15:complement(30278973..30622232)
Genome browser
AA seq
1105 aa
AA seq
DB search
MGHTSFEKIIALQKKASGIRNICILAHVDHGKTTLADCLVASNGIISTRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYKTGESEYLINLIDSPGHVDFSSEVSTAVRLCDGAIVIVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKLSPQESYTHLQKILEQVNAVTGTL
FTSKVLEERAVKEAQVQEERPEADGGEQVYDWSSGLEETDDSHLYFSPDQGNVVFASAID
SWGFSIHQFAKIYSQKMGIRYELLQKTLWGDFYLNAKAKKIMKGAQSKGKKPLFVQLVLD
NIWSLYDAVVIRRDKEKVEKMVTSLGLKIMARDLRHSDPKVLLCAICSQWLPVSQAVLSM
VCEKLPAPTEVSCERVEKLMSVGMRRFDSLPEKTQQLKKAFLECASEESAPVIVFVSKMF
AVDSKALPQNKQRPLTQDEIAQRREMARQKHAERQAANQSSENPEATITTKPDTDGLCVQ
TEALTVKSASEEEEKECFVAFARVYSGVVRKGQRAFVLGPKYDPAVALQTLTDECSIPDS
MPAVPHMACCTLDRLYLLMGRELEELDEVPAGNVLGIGGMEEFVLKSATISTSAACPPFT
PLNFEATPIVRVAIEPKHPSEMPKLVQGMRLLNQADPCVEVLIQESGEHVLITAGEVHLQ
RCLDDLRERFAKIEISASAPIIPFRETVIRPPKVDMVNEELGRQQKVAVIHQTKEEQTKL
PEGVQIDSSGLVTLTTPNKMATIGVRAVPLPEEVTRLLEKNAELIRTMEHFNLLAREGKA
VEISSKTLEEIHGLKAELEKHLQGHKWRNAVERIWAFGPRRYGPNILLNSVEGYQRPSVW
QFLNLEKEKSEGTILRDFDNSIGSGFQLATLSGPMCEEPLMGVCFSVESWDMKIPSQTVL
KDSEDDFIPQQSLEANNNEHELGEDSEAQSKRRDIADCYGPFSGQLIASMKEACRYAFQA
KPQRLMAAMYTCEIMATAEVLGRVYGVLSKREGRVLNEEMKEGSDVFIIRAVLPVAESFG
FADDIRKRTSGLASPQLVFTHWEVISSDPFWVPTTEEEYLHFGEKADSANQALKYVNAVR
KRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggggcacacaagtttcgaaaaaatcattgcactacagaagaaagcatcaggcattaga
aatatctgtattttggcccatgtggatcatgggaaaacaacactggcagattgtttggtt
gcaagcaatggcatcatttccactcgcttggcagggaagctccggtacctggacagccgg
gaggacgaacagatccgagggatcactatgaagtccagtgccatttcattacactataag
acgggagagagcgaataccttattaacctgatcgactctcccggtcatgtggatttctcc
tctgaggtgtctacggctgtacgactgtgtgacggagccatcgtcatcgtggacgcagta
gaaggagtgtgtcctcagacacaagcagtgttgcgtcaggcatggctggagaacattcga
cctgtgctggttatcaacaagatcgaccggctaatcgtggagctcaagcttagtcctcaa
gagtcctatacacacctccagaaaattctcgaacaagtgaacgccgtgacaggcactctg
ttcacttcgaaagtgctggaggagcgggcagtgaaggaggcacaggttcaggaagagcgc
cctgaggctgacggaggagagcaggtttatgactggagctcaggtctggaggaaactgac
gactcgcatctatatttcagccctgaccagggcaacgtggtgtttgccagcgctatcgac
tcgtggggattcagtatccatcagtttgcaaagatctacagccagaagatggggattcgc
tacgagcttctacagaagactctgtggggggatttctacctgaatgccaaggccaaaaag
atcatgaagggagcacagtctaaaggaaaaaagccgctttttgttcagctggtcctggac
aatatctggagtttgtatgacgctgtggttatcagaagagacaaagagaaggtggagaag
atggtgacctcgttggggttaaagatcatggcccgagaccttcgccactctgacccgaaa
gtgctcctgtgtgccatctgcagtcagtggctgcccgtgtctcaggcagtgctctcgatg
gtgtgtgagaagttgccggctcccactgaggtgagctgtgagagggtggagaagctgatg
agtgtgggcatgcgcaggttcgactccctgcctgaaaaaacacagcagctgaaaaaagca
ttcttggagtgtgcaagtgaagaatccgctccagtcatcgtgtttgtgtcaaagatgttt
gctgtagactcaaaggctctgccacagaacaaacagaggcccttgactcaggatgagatc
gctcagcgtcgagagatggccagacagaaacatgcagagagacaagcggctaatcagagc
tctgaaaacccagaggcaaccatcaccaccaagccagatactgatgggctgtgcgtgcag
acggaggccttgacggtgaagtccgcatcagaagaggaggagaaagagtgctttgtagcc
tttgcacgtgtctacagcggagtagtgcgcaagggtcagagagcgtttgtgctcggaccc
aagtacgaccctgccgtcgccctgcagacgctgacagatgagtgctcaatccccgactcc
atgcctgctgtaccccacatggcctgctgcactctggatcggttgtatttgctgatggga
cgagagctggaggaactcgatgaggttccagcaggcaatgttctgggaatcggtgggatg
gaggagtttgttctaaagtcagccaccatctcaacctcggccgcatgcccccccttcaca
ccactcaacttcgaggccacgcccatcgtcagagtggcgattgaacccaaacatcccagc
gagatgcccaagctggtgcaggggatgcgtctcctgaaccaggctgacccgtgcgtggaa
gttttaattcaggagagcggagagcatgtactcattacagcaggagaagttcatctgcag
cgatgcctcgatgacctccgagagaggtttgccaaaattgagatcagcgcttctgctccc
atcatcccattccgtgagactgtgatccgcccacctaaagtggacatggtgaacgaggag
cttggacgccagcagaaggtcgcagtgatccatcaaaccaaagaggagcaaaccaaactc
ccagaaggggtccagatagattcaagtggcctagtgaccctcaccacacccaacaaaatg
gccacaatcggagttcgggctgttcctctacctgaggaagtaaccaggctgctggagaag
aatgcagagctcattcggaccatggaacatttcaacctgctggcacgagagggcaaagct
gtcgagataagttcaaaaactctggaggaaatccatggtttaaaggctgaattagaaaag
catcttcagggccacaagtggaggaatgcagtggagcgaatctgggcttttggaccgcgt
cgctatggccccaacattcttctgaacagtgttgagggataccaaaggccttcagtgtgg
cagtttctcaatttagagaaggagaaaagcgaaggcaccattctgcgagattttgataac
agcatcgggagtgggttccagttggccacactttcaggccccatgtgtgaggagccactg
atgggtgtctgcttctccgtggagagctgggacatgaaaatcccatctcagacagtgctg
aaggactcagaggatgactttatccctcagcagagtttggaggcaaataataacgaacat
gagcttggagaagacagtgaggcgcagagcaagcgtcgagacatagctgactgctacggg
ccattttcaggtcagctcatcgcttccatgaaagaggcttgcagatatgccttccaagca
aaaccacagcgtctcatggctgccatgtacacctgtgagatcatggctacagctgaggtc
ttagggcgtgtgtatggtgtcctctccaagcgtgaaggtcgtgtcctcaatgaggaaatg
aaggagggatcagacgtgttcatcatcagagccgtgctgccagtggccgaaagcttcggt
ttcgctgatgacatccgcaagaggacgagcggcctggcaagcccccaactggtcttcact
cactgggaggtcatctccagtgatccgttctgggtgcccactactgaagaagaatatctc
cattttggagaaaaggcagattcagccaatcaggcactgaaatacgtgaatgccgtgcgg
aagcgcaaagggctttacgtggaggagaaaatcgtcgaacacgctgagaaacaacggact
ctcagcaagaacaaatga
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