KEGG   Neoarius graeffei (lesser salmon catfish): 132899345
Entry
132899345         CDS       T10798                                 
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ngra04121]
    132899345 (rnf13)
Enzymes [BR:ngra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132899345 (rnf13)
Ubiquitin system [BR:ngra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132899345 (rnf13)
SSDB
Motif
Pfam: zf-RING_2 PA zf-RING_11 zf-C3HC4 zf-C3HC4_2 zf-rbx1 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf_RING_Vps8 zf-ANAPC11 Collectrin DUF6680 Prok-RING_4 zf_RING_Vps8_fungal
Other DBs
NCBI-GeneID: 132899345
NCBI-ProteinID: XP_060797116
LinkDB
Position
15:complement(31382320..31418875)
AA seq 361 aa
MLMLSLTQIFFITFVSLQPVEANIVAYLDDNRTETFNDAPAHFGHRLPSEGLKGFLIGAR
PENGCVSIDPPPIGGNSHNCFIVLIKRYHCNFDIKVLNAQRAGYMAAIVHNVDSEELVIM
GSDDLEVKQINIPAVFIGEKAAQSLLEEYSYERGGSVILIPDFSLPLEYYLISFLVVLGI
CLIPIVIIVITKFVQARHRARRGRLQKDQLKKLPVHKYKKGDIYDVCAICLDEYEEGEKL
RVLPCSHAYHCKCVDPWLTKTKRTCPVCKQTVVPAGSESDSSSGGDESDEVSESTPLLRP
HPPARIRTPSLTSTLSASTSPPDCSHSDSESDSTEEEGEGEVVTVETVVLLQQEGPDVIN
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgctgatgctctcactcactcagatcttcttcatcaccttcgtcagcctgcagcctgtg
gaggccaacatcgtagcgtacttggatgataatcggacagagacatttaatgatgctcct
gcccattttggacacagattacccagcgagggcctgaagggtttcctgattggtgctcgg
cctgagaatgggtgtgtatcaattgatcctccaccaatcggagggaactcccacaactgc
ttcatcgtcctcatcaaacgataccactgcaatttcgacatcaaggtgctgaatgctcag
agggcaggttacatggccgccattgttcacaatgtagattcagaggagctcgtcattatg
ggatctgatgacttggaggtgaagcagatcaacatcccagctgtgtttatcggagaaaag
gctgctcagtctttattggaggagtacagttacgagagaggaggttctgtaatcctgatt
cctgatttcagtttgccgttggaatattacctgatctcgttccttgtcgtcctgggaatc
tgtctgattcccattgtgatcattgtgatcaccaagtttgttcaggcccgacacagagcc
cgacggggccgactgcagaaggaccaactgaagaaactccccgtccataaatacaaaaaa
ggtgacatctatgatgtgtgtgcaatctgtctggatgagtatgaggagggggagaagctg
cgtgtgctgccctgttcacatgcatatcactgtaagtgtgtggacccatggctaacaaag
acgaagaggacgtgtcctgtgtgtaagcagacagtggttccggctggttcggaatccgac
tcgagcagcggcggagatgagagtgatgaggtttctgaaagcacgccattgctccggcca
cacccccctgcccgaatccgcaccccctctctcaccagcacactctctgcctccaccagc
cctcctgactgctcccattctgactctgagtctgactccactgaggaagagggggaaggg
gaggtggtcaccgtggaaacagttgtgttgttgcagcaggaaggacctgatgtcatcaat
gcctaa

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