Neoarius graeffei (lesser salmon catfish): 132899364
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Entry
132899364 CDS
T10798
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132899364 (sox2)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132899364 (sox2)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132899364
NCBI-ProteinID:
XP_060797150
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Position
15:complement(34670977..34673149)
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AA seq
332 aa
AA seq
DB search
MYNMMETELKPNPGGNNTGTGNTGGGTPGQKNSPERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK
YALPGGLLAPGGGGGGNLGGNSMGAGVGSGLGGLGVNLGVNQRMDAYAHMNGCWSNGGYG
MMQEQLGYAAAASPMQQQQQQHHVHRYDMSALQPYGSMTSAQTYMNGSPTYSMSSYPQLS
SMGSAVKSESSSSPPAVTSASHVRAAAAPAPAHAPPPPSCQTGDLRDMISMYLPGAEVAE
QTGQSRLHLSQHYQSAPVHATTINGTIPLSHM
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagaccgagttgaaacccaatcccgggggtaataacaccggcacc
gggaacaccggaggcggcacaccgggacagaagaacagtccagagcgcgtaaagaggccc
atgaacgcgttcatggtgtggtcccgcggtcagcggcggaaaatggcgcaagagaacccg
aagatgcacaactcagagatcagtaagaggctgggcgctgagtggaagctgctgtccgag
tctgagaagcggccgttcattgacgaggccaagcggctgcgcgctctgcacatgaaggag
cacccggactacaagtaccgaccgcggcggaagaccaagacactcatgaagaaggacaag
tacgcgttgcccggcggactcctggcaccgggcggcggcggcggcggaaacctgggcggt
aacagcatgggcgctggcgtgggctcgggcctcggcggcctcggcgtcaacctcggggtc
aatcagaggatggacgcgtacgcgcatatgaacggctgctggagcaacggaggctacggc
atgatgcaggagcagttgggctacgcggcggcggcgagtcccatgcagcagcagcaacag
cagcaccacgttcaccgctacgacatgagcgcgctgcagccgtacggctccatgacgagc
gcgcagacctacatgaacggctcgcccacgtacagcatgtcgtcttaccctcagctcagc
tccatgggctcagctgtgaaatccgagtccagctcgagtccacccgctgtaacgtccgcg
tcgcacgtcagagccgccgcagcgcccgcacctgcacacgcaccgccgccgccctcgtgc
caaaccggggacctgcgggacatgatcagcatgtatctgcccggggcggaagtggctgag
cagacgggtcagagcagactgcacctgtcgcagcactaccagagcgcacctgtacacgcc
accacgattaacggcaccatcccgttatcgcacatgtaa
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