Neoarius graeffei (lesser salmon catfish): 132899388
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Entry
132899388 CDS
T10798
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132899388 (trmt13)
Enzymes [BR:
ngra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
132899388 (trmt13)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
132899388 (trmt13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
132899388
NCBI-ProteinID:
XP_060797198
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All DBs
Position
15:36282182..36296983
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AA seq
455 aa
AA seq
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MAAVASDGVSAPLPGRCGFYVAKKKRYCKMVAGNGRKFCGEHGNADPHCERKRIPCPLDP
KHTVFEDSLVKHLKKCNSKEKPKPVYYVKDINAGSVTEEENATDEVSIAERSKEELDGLI
QKLKTAVKGLNTEPDTSLLSHPALNEALNDPKNGNFAFKHLKQQASILGNMEALDLLGSK
RCYVEFGAGKGKLSHWIHVALQEAENVHFLLVERSSTRFKVDGKHKNTDSTFDRLQVDIQ
HLDLSRVPFLQEKRLPVIAVGKHLCGAATDLALRCLFERSAKDHEPPTKRLKLQEGSEEV
MHGSESSKEVVVSGLAVALCCHHRCDWRHYVGKDFFRERGLGATEFSAFQRMSSWATCGM
SKVKSSLNPENSSQENVKDEEGEEGEHEGSSEDVPDHLNNAVSAEEREYVGRLCKMLINH
GRLHYLQQKGFTSSLRYYTSRDVSLENVLLTALPS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcgcatcagatggagtttcagctcctttacccgggcgatgtggcttttat
gtggcaaaaaagaaacgttactgtaaaatggtggctgggaatggaagaaagttttgcggt
gaacacggaaatgcagatccacattgtgagagaaaacggatcccctgccctctggaccca
aagcacactgtgtttgaagacagtttggtaaaacacctgaaaaagtgtaattcaaaggag
aagcccaaacctgtctactatgtgaaagacatcaatgctgggtctgtaactgaagaggaa
aacgccactgatgaggtgtcgattgctgagcgatcaaaagaggagctggatggtcttatt
cagaaactgaagactgcagtgaaaggattaaacacagaacctgacacgagccttctctct
catccggctttaaacgaagctcttaacgatcccaagaatgggaactttgcttttaaacac
ctcaagcagcaggcctcaatcctggggaatatggaggctctggatctcctcgggtcgaag
agatgttatgtggagtttggtgctggaaaaggtaaactctctcactggattcacgttgcc
cttcaggaagccgagaacgtccacttcctgttagtggagaggtccagtactcgctttaag
gtagatggcaaacacaaaaacacagactcaacattcgacaggctgcaggttgacattcag
caccttgacttaagcagagtgccgtttttacaagaaaaacgacttcctgtaatcgcagtg
ggcaaacatctgtgtggtgcagcaacagatttagctctgagatgtttatttgagcgcagt
gccaaagaccatgagcctcctactaaacgtttaaaactgcaggaaggcagtgaggaggtg
atgcatggttctgaaagcagcaaggaggtcgtggtgtcggggctcgctgtcgcactctgc
tgccatcatcgctgtgactggaggcattatgtaggaaaggactttttccgagagcgaggt
ctcggagccacagagttttcagctttccagcgcatgtccagctgggctacgtgtggcatg
agcaaagtcaaatcctccttaaatcctgagaactcctcccaagagaacgtcaaagacgaa
gaaggagaagagggtgaacacgaagggagttctgaagacgtacctgatcatctcaacaat
gccgtttcagcagaggagcgcgagtacgtcggacgcctgtgcaagatgctgatcaaccac
ggcaggctgcattacctccagcagaaaggcttcacatccagcctcagatactacaccagc
cgagacgtgtctttagagaacgtcctcctgactgcgcttcccagttaa
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