Neoarius graeffei (lesser salmon catfish): 132899439
Help
Entry
132899439 CDS
T10798
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
ngra
Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03420
Nucleotide excision repair
ngra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132899439 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
132899439 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ngra03051
]
132899439 (rad23ab)
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132899439 (rad23ab)
Proteasome [BR:
ngra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
132899439 (rad23ab)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
132899439 (rad23ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
UBA_3
Rad60-SLD_2
UBA2_UBAP-1
Crinkler
Dsc3_N
Ubiquitin_2
CUE
UBA_2
DUF1421
Methyltransf_10
Motif
Other DBs
NCBI-GeneID:
132899439
NCBI-ProteinID:
XP_060797292
LinkDB
All DBs
Position
15:complement(40611034..40627036)
Genome browser
AA seq
489 aa
AA seq
DB search
MLTITLKTLQQQTFKIQMDEELTVRALKEKIESEKGQDAYPIAGQKLIYAGKILNDDIPL
KEYKIEEKNFVVVMVTKPKPAAPPVVAIPLPDLSLQSLSIPAPPPSAPAAPEPTPTSTST
SVTAAVPTPTTAPAPITPASAPAPTITPASAPAPTIAPASAPAPTITSASAPAPTITPAS
APEPTITPASAPAPTPTPALVEPLQSVEPPAPPATVPPAAAPAASVESVETESASAQATS
ADQPQRAEPEQPSNPTAALSAASIMDELGLLEEAASILVTGQAYENLVTEIMSMGYEREQ
VVAALRASYNNPDRAVEYLLMGIPAEPEQPAQEAVRPAAETERPQPPPAATGATPSQAPP
TSGNPLEFLRNQPQFQQMRQIIQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNE
PLGGEAEAAEAQGAPHTNYIQVTQQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANF
LLQQTFDDE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgattacgctgaaaactctacaacaacaaacctttaagatacaaatggacgaa
gagctgacggtacgtgctcttaaagagaagattgaatctgaaaagggccaggatgcttat
cccatagctggacagaagctcatctatgcagggaaaatcttgaatgatgacataccttta
aaagaatacaaaatagaggagaagaactttgttgtggtcatggtaactaagccgaaacca
gcagctcctcctgtggttgctattcctctccctgacctttcacttcagtccctttctata
cctgctccccctccatctgccccagcagctcctgaacccaccccaacctccacatccacc
tctgtaactgctgctgtacccactcctacaactgcccctgcacccatcacccctgcatct
gcgcctgcacccaccatcacccctgcgtcggcccctgcacccaccatcgcccctgcatcg
gcccctgcacccactatcacctctgcatctgcccctgcacccactatcacccctgcatct
gcccctgaacccactatcacccctgcatctgccccagcacctacacccacacctgccctt
gttgaaccactacagtctgtggagcctcctgctcctccagccacagtgccccctgctgct
gcccctgctgccagtgtggagtcagtggagacggagagtgcaagtgctcaggctacatct
gcagatcagccgcagagagccgaaccagagcagccatcaaaccccactgcagctctctca
gctgccagcattatggatgaactgggccttttggaagaagcagcatcaatacttgtcaca
ggacaggcatatgagaatttggtgaccgagatcatgtccatgggatatgagagggagcag
gttgtcgccgccttgagagcgagctacaacaatcctgaccgagcggtggaatacctgctc
atgggtattcctgctgaaccagagcagcctgcacaggaagcagtgcgaccggccgcagaa
accgagagacctcaacctccaccagcagccactggtgctacgccctcccaggccccgccc
acttcaggtaaccccctggagttcctgaggaaccagcctcagttccaacaaatgcgtcag
atcatccagcagaacccggcgctcctccctgccctgctgcagcaactgggccgggataac
cctcagctcctgcagcaaatcacgcagcaccaggagcgatttgtgcagatgcttaatgag
ccgctgggaggagaagcggaggcagcagaagcacagggagctccacacactaactacatc
caggtcacacagcaggagaaagaggccatcgagcggttaaaagctttgggtttccctgag
ggactagtcattcaggcttatttcgcctgtgaaaaaaacgagaacctagcagccaacttc
ctgctccagcagaccttcgacgacgagtga
DBGET
integrated database retrieval system
