Neoarius graeffei (lesser salmon catfish): 132899459
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Entry
132899459 CDS
T10798
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04512
ECM-receptor interaction
Brite
Lectins [BR:
ngra04091
]
C-Type lectins
Lecticans
132899459 (frem1b)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132899459
NCBI-ProteinID:
XP_060797322
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Position
15:41876643..41929225
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AA seq
2154 aa
AA seq
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MEVVDLVWTFIALSYFLPLNQAESVLRLNSGLRVIQGQSVPVTTEELQFNTDEMSEACKV
EVVLNEPVTQRVGKLTPQVFDCHFHPDEVKYVHNGSPLLEEDTVMLRVYRFTHSETFTET
FLLKVQVLGAQRSLIEFGKVPLVVSEFYGLSNTIDSNVLTFRSEPDVICTVRLLTSEINI
PMLGQVIKEDLAQRNQASELIPGLRKGRQTTISCPGNKACVHDTREVHFLKTSCSEFLTS
GLKYQHLNPPSPEIDYVPLRVEIRDQNTRALLKAENVWLPVLIHGAMQNQPPYAAFMSMF
ILEVDQFILTPLTTAALDAKDDETPQAQLVFNMTKPPAEGYITHLDDHTKAVFSFSWQDL
NEMKIAYQPPNSSHASRKNIEVDFQAIDGFFRTSPPIMMHISIRTAETNAPRVSWNLGLD
LLEGQSRPITWENLQIVDNDNIDVVTLVAVDGPLHGQLSVRGVKGFMFKVKDLYKGVVVY
HHSDSDTTSDYIIFRITDGRHSIRHKFPINILPKDDTPPFLINNVAFEVQEGGSVLVEEY
MLMATDLDSSDDYIQYQLVTFPSAGSIVRKSSAHDPGVPVKTFLQRDILQGLIYYRHTGE
EIFEDSFDFILSDIHEPPNLSYRHTVVVHVFPVKDQLPVEVPGTVRSITVKETELVYITQ
SHLHFQAPEHPDTDLMYFITQSCFSPTKPQLPDAGRLFYTETTKSMKKDAMIPVLKSFTQ
HAVTHHKIAYMPPVEDIGPESLFVQFVFSVNDQQGGMLTGLIFNITVTPVDNQVPEVFTN
LLRVEEGGSSFLMEEHLLVRDADSLMEKLRVELRTQPQHGRLELQGVALSEGESFHLQDL
KTLRVRYIHDDSETTKDSIGLMITDGINSAQSELLVQIFPVNDEPPQLGSSLRDGLSCKE
GSRVQITAEYLFATDLDSDDTQLTYMLARTPAHGVLQRNGVTVDKFSQLDVLNGLVFYLH
TGGEIGPESISDTITLIVSDGEAGTDSCCQEDAVPPPVPLHGTLPVYDLNVTVTPVNNQA
PSIIIGNMLVVDEGTSACLCGDLLMATDLDTKPDQLNFFLDIPPQYGFLENTLPSPGFEK
SNAGIQVVSFSQLHLNSRLINYVQSIHQGVEPTADHFSISVSDGVHKSESVPFYIVINPT
NDEAPSLFLHNFTVMEGGMKDLNPAILNAVDLDAPPDLLRFTILVPPAHGTLLHGIYGLD
MSQYKDMGPEILQRSIPVQSFTMQTLQQGMKIMYMHNDTETHEDTFTMQLTDGRHAVQGM
SWVHILPVNDEKPRLIKNAGLEVEALERRRVISSVVLEAEDHDTPSNQVYYILNAGPRFG
LLQLKTEAGFTDLNAGQNFTQDDVEMNRLFYKHTTFSGFKGHDRFHFFLSDGDNEIPPQS
FFITVQTVQKGDIVLITKPMTISEGERIVLTTDILMATDSGSQSTELIYTVTIPPKHGHL
HMVQHPGIPLLSFTQMDVASHRVCYTHDNSHFTDYDSFSFDISNGVTSIRSSLTFTVEHH
DHIPPTLSINTGLQLTESTTKTISSEHLQLTDPDTALENLTYTIIQPPQHGKLLLKGFPL
SWTHFTQLDINNKHLSYQHLNSFAKIDRFTFQPSDGTNKGYLEYGQLKEQVAVFTIQIEV
LDKTPPHIVSKGTPSTVEYLQNNQHGISITSKDLQATDPDSFNQELEFIITRPPQFGYLE
NAITGGYIKGRFTQKDVDQKAVRYIIPSDKEVTADSFEFQLTDPAGNIMLPEVMELLWSR
VELTASCYRVCENTGTLAVQVMRSGNSVDPAYVGIQVEDGTAKVGKDFTHSSASLIQFDP
GVTLKFWNIYLKDDGLEENHERLEVVLKAQKNVILGARSRASVEIVDPRHGRCDPDDLFV
EDDEKKSPVLHPPRFHKPPPPPTAGAAEDYTPDPNTGIEWEKYPPRGDVPYRTQFSHFNG
GETADQSFFSQGRRQLRPLGNNRPRVRQESSHISWLHRLTPIRPEVEIPMPRVHPELEIT
PIWNWPGHSADSISAETPQRDTFLNGFTSAVRQHKSAKAISVGCLPGWTHYRRRCYILGP
GVASWRNAQYACTVLDSHLTSVRSKTHMKWLWRFAGKQPFWIGLSGSPDWWFWADGTPLK
FSRLKTNKALDRHVPSGTSHSCVLAQDQKMWTRENCTSVAEHKYICSASAEVNK
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtagatcttgtatggacattcattgccttaagctacttcctgccactgaac
caggcagaaagtgtgttgaggttgaactctggactgcgggtgatccaaggccagagtgtt
cctgtgaccacagaagagctgcagttcaacactgatgaaatgtcagaggcctgcaaagta
gaggtggtgctcaatgagcctgtgactcagagggtcggaaaacttactcctcaggtattt
gactgccacttccaccctgatgaagtgaaatatgtccataatgggagtccattattggaa
gaggacacagtcatgctgagagtctatagattcacgcattctgaaacatttactgagacg
ttcctcctgaaagttcaggtactgggagctcagaggagtctcatagagtttgggaaagtt
cctctggtggtttcagagttttacggcctgtctaacacgattgacagcaatgtgttgacc
ttcagatctgagcctgacgttatctgtaccgtccgtctcctcacctctgagatcaacatc
cctatgttgggtcaggtcattaaagaggatctggcacaaagaaatcaggcatctgagctg
atccctgggttgaggaaaggtcgacaaacaactatttcttgccctggaaataaggcctgt
gtccatgacaccagagaggtacacttcctgaagaccagctgcagtgagttcctcacatca
ggtttaaagtaccaacacctcaaccctccttcacctgaaattgactatgtgccactccga
gtggaaatcagagatcaaaacacccgagccctcttaaaggcagagaatgtttggctccca
gtcctgatccatggagccatgcagaaccagcctccctacgctgctttcatgtccatgttc
atcctagaagtagatcagttcatcctaacccctctgaccacagctgctctggatgccaaa
gatgatgaaacgccacaggcccagctggtgtttaacatgaccaagcctccagcagaggga
tacatcacacatctggatgaccacaccaaggctgtattctctttctcttggcaagacttg
aatgagatgaagattgcgtatcagcccccaaacagcagccatgccagcagaaagaatatt
gaggttgatttccaggctattgatggcttcttcagaactagtcctcctattatgatgcac
atctcaatccgcacagcagaaacaaatgctcctcgagtctcctggaatctggggctggat
ctactggagggtcagtccagaccaatcacatgggagaacctgcagattgtcgataatgac
aacatagatgttgtcactctggtagctgtggatggtcctctacatggacaactcagtgtt
cgaggtgtaaagggcttcatgttcaaagtgaaggacctctataagggcgtagtggtttat
catcattctgatagtgacactacgagtgattacatcatcttcagaatcacagatggacgc
catagcatccgtcacaagttccccatcaatatcctccccaaagatgacactcctcctttt
cttatcaacaacgtagcatttgaggtgcaggaggggggttcagtgctggtggaagagtat
atgcttatggcaacagatctggattccagtgatgactatattcagtaccagcttgttact
ttccccagtgctggaagcatagtcaggaaaagctctgcacatgatccaggcgttccagtg
aagacatttttacagagggacatattacagggcctgatctactacagacacacaggagag
gagatttttgaagactcgttcgacttcatcctctctgacatccatgaaccaccaaatcta
tcttacagacatactgtggtggtccatgtgttccctgtgaaggaccagttaccagtggag
gtccccggcacagtccgttccatcacagttaaagagacagagcttgtttatatcacacag
agccaccttcacttccaagcccctgagcacccagacactgacctgatgtacttcatcacc
caatcctgtttcagccctaccaaacctcagctaccagatgcaggtcgactcttctacaca
gaaactacaaaatccatgaaaaaagatgccatgattccagtgcttaagtcattcactcag
catgcagtgacccaccacaaaatagcctatatgccccctgtagaggatattggtcctgag
tcactcttcgtgcagtttgtcttctctgtaaatgaccaacagggtggcatgcttactgga
cttatctttaacatcacagtcacacctgtggacaatcaggttccagaggtgttcactaac
ctgctgagggtggaagagggtggaagtagtttcctgatggaggagcacctattggtgcgt
gatgctgacagtctgatggagaaactcagggtggagttgcggacacaaccccaacatggc
agactggagctgcagggagtggcgctatcagaaggggaaagcttccacctacaggatcta
aaaacactgagagtcagatatatccatgatgactctgagacaacaaaggacagcataggc
cttatgataacagatggaatcaactctgctcagagtgaacttttggtgcagatcttccct
gtgaatgatgagcccccacagctgggctcaagcctaagagatgggctctcctgcaaggaa
ggcagtcgtgtgcagattactgctgagtatttatttgctacagatttagacagtgatgat
acccaactcacctacatgctggctcggactccggcccatggtgtgctgcagaggaatgga
gtcaccgtggacaaattctctcagcttgatgtgctcaatggactcgtcttctacctgcac
acaggaggtgaaattggtccagagtccatatcagacactattactcttatagtgtctgat
ggagaggctgggacagacagttgctgccaagaagacgcagtcccaccacctgtcccttta
catggaacacttcctgtctatgaccttaatgtcactgtgactccagtcaacaaccaggca
ccatccataattataggaaacatgttggtggtggatgagggaactagtgcatgtctttgt
ggtgatctgctgatggctacagaccttgacactaagccagaccagttaaacttcttcctg
gacatcccacctcagtatggctttctggagaacacccttccctccccaggctttgagaag
agcaatgctggaattcaagtggtttctttcagccagctccatctcaactctagattaatc
aactatgtccagtccattcaccagggtgtggagcccacagcagaccacttcagcattagt
gtcagtgatggagtccataagtctgaatctgtacctttctacattgtcatcaaccccacg
aatgatgaggcgccatctctgtttctgcacaacttcacagtcatggagggaggaatgaaa
gatctcaaccctgccattctaaatgcggtagaccttgatgctccaccagatcttctgcgc
ttcaccatccttgttcctcctgctcacgggactctgctgcatgggatctatgggcttgac
atgagccaatataaggatatgggcccagagattttgcaaaggagtataccagtacagtcc
tttaccatgcaaacactgcaacaaggaatgaagatcatgtatatgcacaatgacacagaa
acccatgaggacactttcaccatgcagctgacagatggcaggcatgctgtccaggggatg
tcatgggtccacattctaccagtcaatgatgaaaagccccggctgataaagaatgcaggt
ttagaggtggaagctttggagaggaggagggttatctccagcgtggtactggaggcagaa
gaccatgacacccccagtaaccaggtctactacattcttaatgcaggccccagatttggc
cttctgcaactcaagacagaagctggattcactgacctgaacgcaggtcaaaactttaca
caggacgatgtggagatgaaccgcctattttacaaacacactacattcagtgggttcaaa
ggtcatgaccgcttccactttttcctcagtgatggagacaatgagatacctccacagagt
ttcttcatcactgtccaaactgttcaaaaaggtgacattgttttgatcactaaacccatg
actatatcggagggggagaggattgtactcacgacagacattctgatggctacagacagt
ggaagccaatcaactgagctcatttacactgtgactatccctcctaaacatggacacctg
cacatggtccagcacccaggaatccctctgctttccttcacccagatggatgtggcttcg
caccgggtgtgctacactcatgacaacagtcattttactgactatgactctttcagcttt
gacatcagcaatggcgtgacctccattaggagtagccttactttcacagtggagcaccat
gaccatatcccacccaccctgagcatcaacactggcctccagcttaccgaaagcaccaca
aaaaccatctcatctgaacacctgcagctcactgatcctgatacagccttagagaacctc
acctacactatcattcaaccaccacaacatggcaagttactgttaaaaggatttcccttg
tcctggacccacttcacacaattagacatcaacaacaagcatctgagctaccagcatctt
aacagctttgccaagattgacaggttcacctttcagccatcagatggaaccaataaaggc
tatctggaatatggacagttgaaggagcaagtggcagtttttacaatacagatagaggtc
ttagacaagacccctccacacattgtaagcaaagggaccccaagtacagtggaatatcta
cagaacaaccaacatggcatctctatcacctccaaagacctccaggctacagatccagac
agctttaaccaggagctggagttcatcatcacacggcctccacaatttggataccttgag
aacgctatcacaggtggctatatcaaaggacgcttcacgcaaaaggatgtggatcagaaa
gcagtccgctacattattccttcagacaaggaagtgacggcagacagctttgagttccag
ctcactgacccagcaggaaatatcatgcttccagaagtaatggagctcctatggtcccgg
gtggagttgacagcttcctgttatcgtgtgtgtgagaacacaggaactctagctgtgcag
gtgatgcgcagtgggaacagtgtagaccctgcctatgttggcatccaggtggaagatggc
acggcaaaggtgggaaaggacttcactcacagctcggctagtctgatacagtttgatcca
ggagtcactctcaaattttggaatatttacctaaaagatgatgggctggaggagaaccac
gagaggctggaggtagtgctgaaagcccagaagaatgttattttaggtgcgagaagcaga
gcctcagtggagattgtggatcccagacatggtagatgtgacccagatgacctgtttgtt
gaggatgatgaaaaaaaatctcctgtcctacatccgccaagattccacaagcctccacct
ccaccaacagcaggagcagcagaagactacacaccagacccaaatactggaattgaatgg
gagaaatatccgccaaggggagatgtcccatatcgcacacagttcagtcacttcaatggt
ggggagacagcggaccagtcattcttcagccaaggaaggagacagctaagacccctggga
aacaatagacctagagtcagacaggaatcttcacatatatcttggctccatagactgact
ccaataaggccagaggtggaaataccaatgcctcgtgtccacccagaacttgagatcact
ccaatctggaactggcctggacattctgctgactccatatcagcagaaactccacagaga
gacacatttctgaatggcttcacttcagctgtacgccagcataagtctgcaaaggctatt
agtgttggttgtcttcctggctggacccattacagacggcgttgctacatcctgggccca
ggtgtagccagctggaggaatgctcagtatgcatgcacagtgcttgacagtcacttgacg
agtgttcgttcaaagactcatatgaagtggctatggaggtttgctggaaaacagccattt
tggattgggctttctggatctccagactggtggttttgggctgacggcacaccactgaaa
ttctccagacttaagacaaataaagctttagaccgtcatgtccccagtggcacctcccac
agctgtgtgctagcccaggaccaaaaaatgtggactagagaaaactgtacatcagtagca
gaacacaaatatatttgctcagcaagtgcagaagtcaacaaataa
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integrated database retrieval system
