Neoarius graeffei (lesser salmon catfish): 132899541
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Entry
132899541 CDS
T10798
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Membrane trafficking [BR:
ngra04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
132899541 (hps3)
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GFIT
Other DBs
NCBI-GeneID:
132899541
NCBI-ProteinID:
XP_060797497
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Position
15:complement(47680710..47724215)
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AA seq
1041 aa
AA seq
DB search
MVHVYNCHPFACQRIVPAAQEPGLVCCGGGALFVVSAGGCKIEAYHMQQEECPLICRFST
MGTVHSIVYSQIGDYLVTIEEKNGATYLRAYTNWRYQAAEKKRVGVRLLGHLMRGPVLHG
TPKEQMEIVEIPLSETPLCTACCSITGALLVACAKSLVLFGLKRQSLSDQVDALDFERLL
ILYVSGWSPLQVALCGVYVALQTELEVLVVKLENLERRRTSNEEHTQLPGDELAAAGVTD
NIDVKKEPQSPLESDDFFMFPKHLEMLGDKAKDCGVSLSLEWTRMETEASDNVGFTYILY
RRFAPDFFQGCSVEETRLHSLQLHPMYTGNLDVSSDAEKSDPACMFCFFSLPNAGYMYSL
KNTVELISTYQYPEKAHQALLCDQFLHVITRNALQCFTVRCSAVAARVEDPYIDTTMKAC
PPFTMEVCALRIQLFIGLKSLGHDGNHIVLLTAADVETKEEPERATRRSAKSKEQNSLAG
IFLAVGINPSTSPALESFLSRSFLSKKTSVSKLKEPSETGHGWNLYVISTVSTLQLYREM
VEYSKRYEQTNPLSQDCVHLLSEAHLLLRASLLCPTVDGDQIQEAFQESCAQLGDCFSRL
DKQDCHLALPYYKMSGLSVTEVIKRNTAICTGPVPHYGKGFLFFLKHSLYEETMEELSEE
TANTVLEIFSKAEPGQLPYVVSSSFMKNANPACARAHLEQLELSGAPSVTVTLCKAAQAL
RLGDLHYYQQQMDRHAEMLQVYGFIEEPKLLVYRKGKAVVPTQLARHLRDTQDGLLVAAI
VALHENSKVKLEEAELFFQELCKDATEPWSIPQLLVDFWEALLVASSQESIIQELLFHLT
SVYIERVMCRKHSGIKALKTAEDLINSCSHYGPLFPWLNILTPAQFNITHDHQEDLQKLQ
SLLCGPTLDVSSIVPLLEQLPDADNTGLSVHVLCATKLGHHENAIEKLLNRCPQAIVSYA
KHELHSDKMALWWQKLFPELCERMRLSPGDDDFLITALKETLMVVASELNPVEFLDLLPD
DGTAHFFLPHLLTCSQRHLLI
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggttcatgtgtataactgccacccgttcgcctgtcagcggatcgtcccggcggcgcag
gagcccgggctggtgtgctgcggcgggggcgcgctgttcgtcgtctctgctggaggatgt
aagatcgaggcgtatcacatgcagcaggaggaatgtcctctcatctgccgcttctccacc
atgggaacagtgcacagtattgtgtacagtcagatcggggattacctagtcaccattgag
gagaagaatggtgccacctacctgagggcctacaccaactggcgctaccaagcagctgag
aagaagcgtgtaggtgttcgtttgctcgggcacctcatgcgtggtccggttctccatggt
acccccaaggaacagatggagatcgtagagataccattgtcagaaacaccgctctgcact
gcctgctgctccataactggtgccctgctggtggcctgtgcaaagagcctggtgctgttt
ggtttgaagcggcagtcacttagcgatcaagtcgacgcccttgactttgagaggctcctc
atcctgtacgtttctggttggagcccgttgcaggtggcactctgtggtgtgtacgtggcc
ttgcagacagagctggaggttctggtggtgaagctggagaacctagaaaggagacgtacc
tcaaatgaagagcatacacagctgcctggtgatgaattggctgcagctggtgttactgac
aatattgatgttaaaaaagaaccacagagtcccctcgagtccgatgacttctttatgttc
ccgaagcatttggagatgctgggagataaagcaaaggattgtggggtgtctttgtcttta
gagtggactaggatggagacagaagcaagtgacaacgtgggattcacctacatcctgtac
aggaggtttgccccagatttcttccagggctgcagtgtggaggagacacgcttacactcc
ctacagctccaccccatgtacactggtaatctggatgtaagcagtgacgctgaaaagagt
gatcctgcctgtatgttctgtttcttttctctgccaaatgctggttacatgtacagcctg
aagaacaccgtagagctcatttctacttaccagtacccggaaaaagcccatcaggctttg
ctttgcgaccagtttctccatgtcatcacacgaaatgctctgcagtgtttcactgtgaga
tgcagtgccgttgctgctcgagtcgaggacccctacatcgacaccaccatgaaggcctgt
cctcctttcactatggaagtttgcgccctccgtattcagctgttcatcggtctgaagtct
ctgggtcatgacgggaatcacattgtgctgctcacagctgctgacgttgagaccaaagag
gagccggaacgagcgactagaagatctgccaaatcaaaagagcagaattcactggcaggg
attttcctagcggtaggtataaatccatccaccagcccagctctggagagcttcctgtcc
aggtcgttcctatccaagaagacctctgtatcaaagctaaaggagcccagtgagactggc
cacggctggaacctgtatgtgataagcaccgtgtccactttgcagctctacagagagatg
gtggagtacagtaaacgatatgagcagaccaacccgctgtcccaggactgtgttcatctg
ctgagtgaagctcacctgctgctcagagccagtctgctctgtccgaccgtagacggagac
cagatccaggaagccttccaggagagctgtgcacagctgggagactgcttcagcaggctg
gataagcaggattgccacttggctcttccgtactacaagatgtctggcttgtcagtgact
gaggtaatcaagagaaacactgccatatgcacaggtcctgttccacactatgggaaaggc
ttcctcttcttccttaagcactctctctatgaggaaaccatggaagagctcagtgaagaa
actgctaacaccgtgttggagatcttcagtaaggctgagccaggccagctcccatatgta
gtgagcagctcatttatgaagaacgccaatcccgcctgtgcacgtgcacacctggagcag
ctggagctcagtggcgccccatctgtcacagtcacgctgtgcaaggctgctcaggcactg
cgcttaggagacttgcactactaccagcagcagatggatcgacatgctgagatgctgcag
gtgtacggcttcatagaagagcccaagcttcttgtgtatcgcaaagggaaggctgtggtg
cccactcagctggcacggcatctgagggacacccaggatggcctgctggtggctgccatc
gtggcacttcatgagaacagcaaggttaaactggaggaagctgaactcttctttcaggag
ttgtgtaaggatgccacagagccttggagcattcctcagctgctggtggatttttgggag
gctctgctggtggcatcgtctcaggaatcgatcatccaggagcttttgtttcacctcacc
tctgtatacatcgagcgcgtcatgtgcagaaagcactcgggcattaaagcacttaaaaca
gctgaggacttgattaactcctgctctcactatggaccactgttcccatggttgaacatc
ctgactcctgctcaattcaacatcacacatgaccaccaagaagaccttcagaagctgcag
tctctgctgtgtggcccaaccctggatgtgtcctccattgtacctctactagaacagcta
cctgatgcagataacacgggccttagtgtgcatgtgctctgtgccaccaaacttggtcat
catgagaacgccatcgagaagctactgaaccgctgccctcaagccatcgtctcctatgcc
aagcacgagttacacagtgacaaaatggctttgtggtggcagaaactctttcctgagctt
tgtgagaggatgcggctttctcctggagatgatgattttctaatcactgctctcaaagag
actctgatggtggtggccagtgagctgaacccagtagagtttttggacttgttaccagac
gatggtactgcacacttcttcctgcctcatcttctgacatgcagccagaggcatctcctt
atatga
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