Neoarius graeffei (lesser salmon catfish): 132899604
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Entry
132899604 CDS
T10798
Name
(RefSeq) excitatory amino acid transporter 1-like isoform X1
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
132899604
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngra02000
]
132899604
Transporters [BR:
ngra02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
132899604
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Gene cluster
GFIT
Motif
Pfam:
SDF
K-box
Motif
Other DBs
NCBI-GeneID:
132899604
NCBI-ProteinID:
XP_060797614
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Position
15:complement(53796065..53832628)
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AA seq
554 aa
AA seq
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MRNLQTATASYWMMTLRNPVTLRRTGCTMQKQVSGTKVRMCSINRKAIKEFLHRNSYVLF
TVGAVVGGIILGFAVRPQNLSLREIKYLSFPGELLMRMLQMMVLPLIVSSLVTGVSYLDS
KATGKMGVRATVYYIVTTLIAVFIGIVMVSIIRPGKVKRDTPMSNSSSAESVTAADAFLD
LLRNMFPSNLVEACFKQYKTLYMKTVLTKNITVMVNGSGLINATESSQMGNYSTVVQTVQ
EQVEIIPVSGSSNGVNALGLVVFSMFFGFVIGKMKQQGQPLKDFFNCLNDAIMRLVAIIM
WYAPVGILFLIAGKIVEMKDLLQVGRQLGIYMLCVIAGLLIHSLIALPLIFYLSTRKNPY
TFISGLLQALIMAFGTSSSSATLPVTFRCLEENNHVDKRVTRLVLPVGATINMDGGAMYE
AVAAIFIAQVNDIDLNFGQILTISITATASSIGAAGIPQAGLVTTLIVLTSLGLPTEDVA
LLIAVDWFLDRLRTTTNVLGDSFGAGIVEHLSREELQKLDAEISSSVIEVNEKPYQLICQ
ENEGLRHRNSETTM
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacctccaaacagcaacagcctcttactggatgatgactctgagaaacccagtc
accctgaggaggactggttgcactatgcagaaacaagtgtctggaaccaaggtcaggatg
tgttccatcaaccgaaaagccatcaaggagtttctgcatcgcaactcgtatgtgctcttc
actgtgggagcagttgtaggaggaatcattttgggatttgctgtgcgacctcaaaactta
tcactgagagaaataaagtatttatccttccctggagagttactgatgaggatgctacaa
atgatggtccttccactcatagtatcaagtcttgttacaggtgtttcatatttggacagt
aaagccacgggaaagatgggagtgcgggctaccgtttactatattgtgactactttgatt
gctgtgtttattggtattgtcatggtgtccatcataagacctggaaaagtcaaaagagac
actccgatgtctaatagtagcagtgctgagtcagtgacagctgctgatgcatttcttgat
ctacttagaaatatgttcccttctaatttggtggaagcctgctttaaacagtacaaaaca
ctttacatgaaaacagttttgacaaagaacatcactgttatggtgaatggaagtggtctt
attaatgccactgagtccagtcaaatgggaaattacagcacagtcgtgcagaccgtccag
gagcaagtggagattattccagtctctggctcctctaatggagtgaatgcgctgggtcta
gtggtgttctccatgttctttggctttgtgattgggaaaatgaagcagcagggccagcca
ctaaaggacttcttcaactgcctcaatgatgccataatgcgcttggtagcaatcattatg
tggtatgctccagtcggtatcctctttctaattgctggaaagattgttgaaatgaaagac
ctattacaagttggaagacagctgggaatttacatgttgtgtgtcatcgctggtctgctc
atccacagcctcattgctctgcctctaattttctatttgagtacacggaaaaacccctat
accttcatctctggtctgctccaggctttaattatggcctttggaacatcctcaagttca
gccacccttcctgtcaccttccgttgcttggaagagaacaatcatgtcgacaaacgagta
acgcgccttgtattgcctgtgggagctaccataaacatggatggtggagctatgtacgaa
gcagtggctgccattttcatagcccaagttaatgacatagacctgaactttggacaaatc
cttaccatcagtatcacagcgactgcttccagcattggagcagcaggcattcctcaggct
ggtctggtaactacattgattgtactgacatccttaggactgcccaccgaggacgtagca
ctcctcattgctgtggattggttcctggatcgcctcagaaccaccaccaatgtgctggga
gattcattcggagctggcatcgtggaacatctatcaagagaggaactgcagaagctggat
gctgagatcagcagctctgtgattgaggtcaatgaaaaaccttaccagctcatctgccag
gagaatgaaggtctcagacatcgaaacagtgaaacaacaatgtaa
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