Neoarius graeffei (lesser salmon catfish): 132899629
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Entry
132899629 CDS
T10798
Symbol
grin3bb
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04020
Calcium signaling pathway
ngra04080
Neuroactive ligand-receptor interaction
ngra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
132899629 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132899629 (grin3bb)
04082 Neuroactive ligand signaling
132899629 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132899629 (grin3bb)
Ion channels [BR:
ngra04040
]
Ligand-gated channels
Glutamate (ionotropic)
132899629 (grin3bb)
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Ortholog
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Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
132899629
NCBI-ProteinID:
XP_060797658
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Position
15:complement(55923165..56072243)
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AA seq
1129 aa
AA seq
DB search
MPHCAXERSRMNLICPGLLAYFFSLGLYQAMLQCMIVPVHSHPQPCRVLAQIGHTVRLGV
LLPSRRPVRVRAALDRALSAMAESGSHFLPYNLSLDVVAREPADGDPESLFRCVCQSIVV
QGVSAVLAFPQSQDELVQVEFMSSFLEIPFVSIIEHGEPLSTQNRFHLQMMTRIPVSDLA
ELLLTVLQRSGWHEGMAVLCQGWEEAGLLDLLKLHGKMAKGKSHWNLRAALNLSGNSLDQ
KDISDFLEQHFSQDQQPPASVLLLGSDPQCASAVLRSAHDLGLALPTIHWIMGYPLSPDA
LHSIGLPLGLLAYGEVDRKPLDFYIQDTLQLVSRAVAAATLVRPDLALIQNMVNCFDKPN
KHELPSSGQYIARFLSNTSFTGRTGAISVQRNMSRVLTSQRVHIWRLRRDAVGQPTWVTV
GSWEGTQLDVEERALWQSSTPRQRTEAQKGREGSRWRPGFPVSGSRVRVVTLVEHPFVFT
REVDEDGNCPAGQYCLDAGTNSSEMLDRFFATRAQGNKTFLPADYSKCCYGYCIDLLEKL
AEDLNFEFDLYIVGDGKYGAWKGGRWTGLVGDLLNGVADMAVTSFSINSARSKVMDFTSP
FFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFVALHMTALFLTLYEWKSPFGMTPHG
RNRMKVFSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAV
MVGEKTFEELSGIHDAKLHHPSHGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEPTTPD
GVATLKTEPPKLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNV
SEFISRYKSDGYMDMLHDKWYKVVPCGKRVFAMTETLQMGIRHFSGLFVLLCVGVTGALL
TLIGEHAFYRLVLPHIRRRQKFKYWLHTSQKIHRALNMTYEDVKRQRANAEKSCNIQKSQ
PAQPPPPPPPGSFAKWNNESSRAAKELKDNKRVHFNLETLNTRRLLARVVAEGSQGTSGS
TSGARSGSAPSGSRVSSACENGGPVPLQPLPSSPPHLTDPPKDGELEELQEKIEEIRGQL
RDALARRAQLQTALAKERAAAVIPLTQEGPPTVTATICRSLVKDLEGKR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcctcattgcgcgtgagagcgaagcaggatgaatttgatctgccccgggctcttggcg
tacttcttctccttaggattgtaccaggcgatgctccagtgcatgatcgtgccggtccac
tcgcacccgcagccgtgccgcgtgctcgcccaaatcggtcacaccgtgcgccttggcgtg
ctcctgccttcccggcggcccgtgcgcgtgcgagccgccttggaccgtgcgctcagtgcc
atggccgagagcggaagccacttcctgccctacaacctcagtctggacgtggtagcgcgc
gagccggccgacggtgaccctgagtcgctcttccggtgcgtgtgccagtccatagtggtg
cagggggtctcagcagtgctggctttcccccagagccaggacgaactcgtgcaggtggaa
tttatgtcgtcgtttttggaaatccctttcgtgagcatcatagagcacggagagccgctc
agcacccagaaccgatttcacctgcagatgatgacacggatccctgtatcagacctggca
gagcttctgttgacggtgctgcagcggagtggctggcatgagggtatggctgtactctgc
cagggctgggaagaagctggccttctcgacctcctgaagctgcatggtaaaatggccaag
ggcaagtctcattggaacctccgcgctgcccttaacctctcgggtaactcacttgaccaa
aaagatatatcagatttcctggaacagcacttcagccaggaccaacaaccaccagcttcg
gtgctgcttcttgggtccgatccacaatgcgcctctgctgtcctgcgtagtgcccatgac
ctgggtcttgcattgcctactatacactggattatgggatatccattaagcccggatgcc
ttgcattccattggcttaccgctggggctgctggcctatggtgaggttgaccgcaagcct
ctggacttctacattcaagacactttacagctggtcagtcgggcagttgctgctgccaca
ctcgtgcggccagatcttgctctcatccaaaacatggtgaattgttttgataaacccaat
aaacatgaactgccttcatctggacagtacattgccaggtttctgtcaaacacatccttc
acagggcggactggtgcaatcagtgtgcaacggaacatgtcacgcgtgcttacatctcag
cgcgtgcacatctggaggcttcggcgtgatgctgtgggccagcccacctgggtgacggtg
ggcagctgggagggcacccagctggatgttgaggagcgagctctgtggcagagctcaacc
ccacgccaacgcaccgaggcacaaaaaggtcgtgagggcagccgctggaggcctggcttc
cctgtttctgggagccgtgtgcgcgtagtcaccttagtcgagcacccgtttgtgttcacg
agggaggtggatgaggatggcaactgcccagccggacagtactgcctggatgcaggtacc
aacagttcagagatgttggatcgtttttttgccacacgagcacaagggaataaaacattt
cttccagcggattacagtaagtgctgctacggttactgcattgacctgcttgaaaagctg
gccgaagacctgaactttgaatttgacctttacattgtgggagatgggaaatacggtgca
tggaaaggtggccgttggacaggactggtcggagacctgcttaatggcgtggctgatatg
gccgtcaccagcttcagcatcaactcagcacgcagcaaagtgatggacttcaccagccct
ttcttctccaccagcttaggcatcctagtgcgcagcaaggacacggcagcccccattgga
gctttcatgtggccactgcactggtccatgtgggtgggcatctttgtagcactgcacatg
acagcacttttcctcaccctgtatgagtggaaaagcccatttggcatgacaccacatggg
cgtaaccgcatgaaggtgttctcctactcctcagcccttaacctgtgctacgccattctg
tttggccgcacggtatcgagtaagacgcccaagtgctggacaggacgattccttatgaac
ctgtgggccatcttttgcttgttagttttgtccagttacacagccaaccttgctgcagtc
atggttggggaaaagacctttgaagagctttcgggcattcatgatgccaaactccatcac
ccttcccatgggttccgctttggcaccgtacgtgaaagcagtgctgaggactacatgaag
aaaagcttccctgaaatgcacgaatatatgaggagattcaacgagccaaccaccccagat
ggtgtcgctactctcaagacagaaccccctaagcttgatgctttcatcatggacaaagct
ctactggactatgaggtatccatcgatgccgactgtaagctgctgactgtcggcaaaccc
ttcgcgattgaaggttatggaatcggactgccccagaactcgcctctcacgtccaacgtt
tcagaattcatcagccgctacaaatccgacggctacatggacatgctgcacgacaagtgg
tacaaagtggtaccctgtggaaagagagtcttcgccatgacagagacgctgcagatgggc
attcggcatttctcagggctgtttgtgctgctgtgtgtgggcgtgactggggcgttactc
actctcataggtgaacacgccttctaccggttggttctgccccacatccgccgtcggcag
aaattcaagtactggctccataccagccagaaaatccaccgagcactgaatatgacttac
gaggacgtaaaacgacagcgagccaacgcagagaaaagctgcaatattcagaagtcgcag
ccggcacaacctccaccacctccgccaccgggatccttcgccaagtggaacaacgagagc
agccgagcagccaaagagctcaaggacaacaagagggttcactttaacctggagacactg
aacacacggcgcctcctcgctcgcgtagtcgcagagggcagtcagggtacatctggatcc
acatctggggccagatctggttctgcacccagtggaagtcgggtatcgagcgcgtgtgaa
aacggcggcccagtgcctctacagccactcccatcctctccacctcacctgacagaccct
cccaaagacggagagctggaggagctgcaggagaagatcgaggagatccgtggtcagctg
agggatgctctggcccgccgggcccaacttcagactgctctcgccaaagaacgtgctgca
gctgtgattccattgacccaggaagggccacccacggtcacagctacaatttgccgctcc
ctcgtcaaagatttggaaggaaaaaggtga
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