Neoarius graeffei (lesser salmon catfish): 132899938
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Entry
132899938 CDS
T10798
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00310
Lysine degradation
ngra00514
Other types of O-glycan biosynthesis
ngra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
132899938 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
132899938 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ngra01003
]
132899938 (colgalt1a)
Enzymes [BR:
ngra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
132899938 (colgalt1a)
Glycosyltransferases [BR:
ngra01003
]
O-Glycan biosynthesis
O-linked Gal type
132899938 (colgalt1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
LysX_preATP_grasp
Motif
Other DBs
NCBI-GeneID:
132899938
NCBI-ProteinID:
XP_060797969
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All DBs
Position
16:13516225..13539923
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AA seq
606 aa
AA seq
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MFGVVLCLLCLLNISDPVLGYFPEERWSPESPLLAPRVVVALICRNSAHSLPYFFGTIER
LNYPKERIALWVATDHNADNTTHLLRDWLVSVQKLYHYVEWRPKEQPSAYGDEEGPKHWT
NHRYAHVMKLRQAALESAREMWADYLLVVDCDNLLINRNVLWKLIKENKTIVAPMLESRA
AYSNFWCGMTSQGYYKRTPAYLPIRKQVRKGCFAVPMVHSTFLVDLRKESSRLLAFHPPH
DDYSWAFDDIIVFAFSARMAEVQMFVCNKEFYGFLPVPLRSHNTLQDETDSFLHTLLEVN
VRHPPVEPSRYLHPPVRQPDKMGFDEVFMINLQRRTDRRERMLRALRIQGIDCKITAAVD
GKAMNVSEIHTMGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIAERGLKTTLVIED
DLRFEIFFKRRLKNLMSEVEREGLDWDLIYIGRKRMQVDHPEKAVPNIHNLVEADYSYWT
LGYMMSLQGAKKLLKAEPLSKMLPVDEFLPVMFNKHPVSDYMEQFETRDLKAFSAEPLLV
FPTHYTGEPGYISDTETSTVWDNDSMRTDWDRKRSRKTHEQDEISTEAQNTDVLQSPLDS
TARDEL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgttcggggttgttttgtgtttgttgtgtttgctgaacatttccgacccggttctcggt
tactttcccgaagagcgctggagtcctgaatctcctctcctggctccgagggtcgtcgtt
gctctgatctgccgaaattcggcccattctctgccttatttcttcggaaccattgagcgc
ttgaactacccgaaggagcggatcgcgctgtgggttgcgactgatcataatgcagacaac
acgacgcatctgctgcgagactggctcgtcagcgtccagaaactgtaccactacgtggag
tggagacctaaagagcagccgagcgcgtacggagatgaggaaggacccaaacactggacg
aaccaccgatacgctcacgtgatgaagctgcggcaggctgcactggaatcagcccgagag
atgtgggctgactatttactggtggtcgactgtgacaatctcctgatcaaccgaaatgtg
ttatggaagctgattaaggagaataagaccatcgttgccccgatgctggagtctcgagca
gcttattccaacttctggtgtgggatgacttctcagggttactataagcgcacgcctgca
tacctaccaatacgcaagcaggtgaggaaaggctgcttcgccgtgcccatggttcactcc
accttcctggtggatctgcgtaaagaatcctccagactcctggcgtttcaccctccacac
gatgactacagctgggctttcgatgacatcatagtgtttgccttctcagctcgaatggca
gaggtgcagatgttcgtgtgtaacaaagagttttatgggtttttacctgttcccctgcgc
tcccacaacactcttcaggatgaaaccgacagcttccttcacactctcctggaggtcaat
gtgcgacacccccctgtcgagccctccaggtacctccaccctcccgtcagacagcctgat
aagatgggctttgatgaggtgttcatgataaacctgcagcgtcggaccgatcgacgagag
cgcatgctccgagcgctccgcatacaggggatcgactgcaagataacggctgctgtcgat
ggcaaagccatgaatgtgagcgagatccacactatggggatccacatgctgccgggctac
agtgacccctaccacggccggcctctgacaaaaggagaactgggctgcttcctgtctcac
tacaacatctggaaagagattgctgagcgtggcctgaagaccactctggtgatcgaagat
gatctgcgctttgagattttcttcaagcggcgcctgaagaacctgatgagcgaggtggag
agagaagggctcgactgggacctgatttacatcgggagaaagaggatgcaggtggaccat
ccggagaaagccgtgccaaacatacacaacctggtggaggcggattattcctactggacg
ctggggtacatgatgtcattacaaggagcaaaaaagctgctgaaggcagaaccgctgagc
aagatgctgcctgtggatgaatttcttcccgtcatgttcaataaacatcctgtctccgac
tacatggagcagtttgagacgcgagacctgaaggcattttcggctgagcctctgctggtc
ttcccgactcactacacaggcgagccgggctacatcagtgacacagagacgtccaccgtg
tgggacaatgacagcatgcgcacagactgggacagaaaacgctcacgcaagactcacgag
caggacgagatcagcacggaggctcagaacacagacgtgctgcagtctccactggacagc
acggcgagggacgagctctga
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