Neoarius graeffei (lesser salmon catfish): 132899983
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Entry
132899983 CDS
T10798
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04010
MAPK signaling pathway
ngra04020
Calcium signaling pathway
ngra04148
Efferocytosis
ngra04218
Cellular senescence
ngra04310
Wnt signaling pathway
ngra04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132899983 (nfatc1)
04310 Wnt signaling pathway
132899983 (nfatc1)
04020 Calcium signaling pathway
132899983 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132899983 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
132899983 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
132899983 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132899983 (nfatc1)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
132899983 (nfatc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
132899983
NCBI-ProteinID:
XP_060798003
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Position
16:24749428..24834012
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AA seq
858 aa
AA seq
DB search
MKSADEETYSYTPNVSLSLPLSSPCLPTQYHNLQTSPSISVSISQPSSFSPSEDMGTMGY
YQSSGPNGAPALESPRIEITAYGQFPEDEVEENNAPIAKRVNSVVTLTLPSGEGYRDPSC
LSPASSISSRSCHSEPSSYESGYSCNYDNSPQNSPWQSPCVSPKGSSSLLSGTLGPSPRQ
SPTGSPRTSVTDESWTAPRGSRSNSPCGGKRKYSFSSNTSHKYHPYSPNQSPGLSPQTSP
RLSMTEDTWLPNTNQYTNSAIVAAINALSTDGMTDIGEGIPLKTRKTSMEHSTSVSLKIE
PGGEETGSAELCHEEYSTSRLAFKKEGYTSFLDVPHHPYWSKPKPYISPSLPALDWQLPS
SSGPYSLQIEVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLHGYMESEPLTLQLFIGTA
DDRLLRPHAFYQVHRITGKTVSTPSHEIMQANTKVLEIPLLPESNMRAIIDCAGILKLRN
SDIELRKGETDIGRKNTRVRMVFRVHINQPNGRTVSLQVASNPIECSQRSAQELPLVDRQ
SVDSCPATGGERMLISGHNFQPDSKVVFVEKGQDGHHIWEMEAKVEKDSFKPTALLVEIP
TYRSQRISSPVLVNFYICNGKRKRSQYQRFTYLPCNVPTIKTEPHDDYELPRLCAQQHSP
NLTKPYYALQTVPAMMPSEHRACVTATYGPQRLTAKPSSLSCSSSSPSTSPKLQDLSPTH
FSPQCLSPGSNPGLQPSAIPHVSAIQPTPGRYQQSVLYPSGSASSSPGSHPSTPSSAPEL
IFTPSHSLTQSPVTGEATELPKVPVRSGASPLLQDEGAPATLAISIKQEPQELDQMYLDD
VNEIIRNDLSSISVHTHA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagcagatgaagaaacatacagctacacaccaaacgtcagcttatcccttcca
ctgagtagcccatgccttcccacccagtaccacaaccttcagaccagtccctccatctct
gtttctatcagccaaccttcatcattctccccaagtgaagacatgggcacgatgggatac
taccaatcatctggccccaatggagcccctgctctggaaagcccacgcatcgagatcaca
gcttatggtcagttccctgaagatgaggtagaagagaacaatgcacctatagctaaacgt
gtcaactctgtcgtgactttaacattgcccagtggtgaaggttaccgtgaccccagctgc
ctgagcccagctagcagcatttcgtcacgtagctgtcattcagagccttcatcatatgag
tcaggctactcatgcaattatgacaactcaccacagaactcgccgtggcagtccccatgc
gtctcacccaaaggttcctcttcattgctgtctggaaccctgggcccctcgcctcgccaa
tcacctactggatctccccgcaccagtgtgactgatgaaagctggacagcgcctcgtggc
tcccgctccaactccccttgtggtgggaaacggaagtacagctttagcagcaacacctct
cacaagtaccatccatattcacctaaccagtcaccagggctgtctccacaaacctcacct
cgcctcagcatgactgaagacacatggttgcccaacaccaaccagtacaccaattctgct
attgtggcagccattaatgctctcagcacagatggaatgactgatattggagaagggatt
ccactcaagaccaggaaaaccagcatggagcatagcacttctgtgagcctcaagattgag
cctggaggtgaggagacaggctctgcagagctctgtcatgaggagtactccacatcacgc
ctagcatttaagaaggaaggctacactagctttctggatgtaccacatcatccatattgg
tctaaaccaaagccttatatcagcccatctttgccagctcttgactggcagcttccctcc
agttctgggccatacagcctgcagattgaggttcaacctaaatctcaccatcgtgctcac
tatgaaacagaaggaagcagaggggctgtgaaagcgcttgccggaggacatccagtagtt
cagcttcacggctacatggagagtgagcctctgactctgcagctgttcatcgggacggca
gacgaccggctcctgcggccacatgctttttaccaggtccaccgcatcacaggcaagacc
gtgtccacacccagccacgagatcatgcaggccaacaccaaagtgctggagattccactc
ctgcccgagagcaacatgagagccataattgactgtgctgggattctgaagctgcgaaac
tccgacattgagctgcggaaaggtgagacggatatcgggaggaagaacacacgagtcagg
atggtgttccgcgtccatattaaccagcccaatggcaggacagtgtctctgcaggttgca
tccaaccccatcgaatgctcccagcgttctgcacaggagctgcctctggtggacagacag
agtgtggacagctgtcctgccacaggaggagagcgcatgcttatcagtggccataacttc
caacccgattccaaggtggtgtttgtggagaaaggacaagatggccatcacatatgggag
atggaagccaaagttgaaaaggactcctttaaacctacagctttgcttgtggagattcca
acttaccgaagccaaagaatatccagccctgttctggtgaacttctacatatgcaatggc
aaacggaagagaagccaataccaacgattcacctacctaccatgtaatgttcccaccata
aagacagagccacatgatgactatgagctgcctcgcctgtgtgcacagcagcactcccct
aacctcaccaagccatattatgctctgcaaactgtgcctgccatgatgccttcagaacac
agagcctgtgtgacagccacttatggccctcagagactcacagcaaagccttcgtccctg
tcgtgctcctcctcctctcccagcaccagccctaaactgcaggatctctcgcccacacac
ttctctcctcagtgcctctctccaggctcgaatcctgggcttcagccaagtgccatccct
cacgtctcggccatccagcccacgcctggccgctaccagcagtctgtcctctacccatca
ggcagtgcatcctcttctcctggctcccatccatctaccccgagttcagcacctgaactc
atcttcactcccagtcacagtttgacccagtctccagtcacaggtgaggcgacagagctg
cctaaagttccagtcaggagtggggcatctcctcttttacaggatgaaggagcacctgct
acgctggccatcagcatcaaacaggaaccacaagaactggatcaaatgtatctagatgat
gtcaatgagatcataaggaatgacctgtccagcatctctgttcatacccacgcatag
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