Neoarius graeffei (lesser salmon catfish): 132900134
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Entry
132900134 CDS
T10798
Symbol
dscaml1
Name
(RefSeq) cell adhesion molecule DSCAML1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132900134 (dscaml1)
Cell adhesion molecules [BR:
ngra04515
]
Immunoglobulin superfamily
Other
132900134 (dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Pur_ac_phosph_N
Ig_5
V-set_CD47
Ig_6
Sp38
Receptor_2B4
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
132900134
NCBI-ProteinID:
XP_060798150
LinkDB
All DBs
Position
16:complement(56508858..56674337)
Genome browser
AA seq
1943 aa
AA seq
DB search
MRGNVAVFKCLIPSAVQEYVSVVSWEKDTVAIVPGNRFFLTSYGALYISDVQKEDALSTY
RCITKHKYSGETRQSNGARLSVLDPTESTPSVMDSFQSGEVQVGRSVELPCIASGFPNPT
IRWLKDGRPLPADSRWTRRLTGLTISDLRMEDSGNYICEVTNSFGSKEVTGYLNVIEPLR
VTVSPKNLKTGISSTVILSCAVQGSPHFTVSWFRNTEPVLPDQHFSIQGTNNETLFITAA
QKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVSSFSERVVAPGEPFSLMCAAKGAPP
PTITWTLDDEPIARDSAHRASQYTLSDGSTVSHVNVSNPQIRDGGVYRCAARNSAGSAEY
QARINVRGPPSIRAMRNITAVAGRNTFINCRVIGYPYYSIKWYKDGMLLPDNHRQVVYEN
GTLKLSDVQKGMDEGAYLCSVLIQPQLSISQTVYVTVKVPPLIQPFDFPPTSIGKLMYIA
CVVSSGDMPIRITWRKDGQEIVSGTSGVTIETKEFMSSLQISKVSLKHNGNYTCIASNDA
ATVSSERQLIVTVPPRFRVQPNNQDGIYGKSGVLNCSVDGYPPPKVMWKHAKGIVSGIGN
PQQYHPVPLTGRIQIMPNGSLLIRHVLEEDRGYYLCQASNGVGSDISKSMLLTVKIPAMI
TSHPNTTMAIKGQNKELNCTARGEYPIIIRWERGDTVIDPDRNPRYSITTSPNEKSDEVI
STLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREVKDRSMNLRWTQ
RFDGNSIITSYDIEYKNKSDPWELKHATRKISPTNNQANIVELHPASVYSIRMYSYNKIG
RSQASKELTISTEEASPDGPPIDVILQPVTSQSIRVTWKAPKKELQNGVIRGYQIGYREN
GPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDV
PSQPPQNVRAITVTSDEAVITWSEPPRMTLNGVLKGYRVVFWSLFPDGEWGEMQNITTIR
EQVELKGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDFPGPPAGIKAVPSSASSVVV
SWLPPNKPNGIIRKYTIYCSSPGSAQPAPSEYEANPEVLFYRITHLNQGQQYLIWAAAVT
TAGRGNISEKVTVEPALKAPAKILSFGGTVTTPWMKEVRLPCSSVGEPTPTIKWTKDSEN
TAIPVSQDGQRNILANGTLLLRSVKAEDSGYYTCTATNTLGFDTIIVNLLVQVPPDQPRL
TVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFISSTERSFKLDNLRCGT
WYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPLLTHINSTHARLNLQGWSSGGCP
INAVLLDFRPKGTYAWQSVRTNGTTDVFLADLREATWYELKMKACNSAGCGNQTSQFATL
DYDGSTIPPIKSARGEGDDVKKLFSIGCPVILVTLGMALLFIIRKKRKEKRLKRLRDAKS
LAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKATIPVTDTEF
SQSVNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWT
LTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYE
ELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEPGICRF
TASPPKPQDYDRGKNVAVPIPHRANKSEYCNLPLYMKTEPFFRKQAELHDPCPVVPPREA
SIRGLAARAYHTQGRHMTLDPSKQQALTLSHGGLSSLTSSGASGPASSTTTGGSSISSGT
STLPQRTLTMPSSSSTSSAGQSTGAAGAAVGAVASSGSTGGGGVSSSSKVGGSRDSLLES
SSSGLGRLQKQSAGAYSKSYTLV
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcaacgtggctgtcttcaagtgcctcattccttcagccgtgcaggagtatgtc
agcgtggtctcctgggaaaaggacaccgttgccattgttccaggtaacaggtttttcttg
acatcctatggagccctgtacatatcagacgtgcagaaagaggacgcgctttctacttac
cgctgcattaccaaacacaagtacagtggagagactcggcagagcaatggcgctcgtctc
tctgtgttagatcctactgagtccacaccctcagtgatggacagcttccagtcaggtgaa
gtgcaggtgggtcgcagtgtggagctgccatgcattgcctcaggcttccccaatcccact
atccgttggctgaaggatggaaggccgcttccggctgactcccgctggaccaggcgtctg
acaggcctgaccatcagtgacctacgcatggaggattcaggcaactacatctgtgaggtc
accaatagctttggctccaaggaggtcacgggatacctcaatgtgatagagccactaagg
gtcactgtctcccctaaaaacttgaagacaggtatcagcagtacagtgatcctgtcctgt
gctgttcaaggttccccacatttcactgtgtcctggttccggaacacagagcctgtactt
cctgaccagcacttctccattcagggcaccaacaatgagactctgttcatcactgctgcc
cagaaaagacactcgggcgcgtatcagtgctttgcaactcgcaagggtcaaactgcccag
gacttctccattatactgctggaagatggcacacccaggattgtctcctcctttagtgaa
cgtgtggtggcaccaggcgaacccttctctctcatgtgtgcagccaaaggtgcccctcca
cccaccattacttggaccctggatgatgagccaatcgctcgggactcggcgcaccgggcc
agtcagtacacgctctcggacggctccactgtatcgcatgttaacgtcagcaacccccag
atccgcgacgggggcgtgtaccgctgcgctgcacgcaactcggccggtagcgccgagtac
caagcgcgcataaacgtaagaggacccccaagtatcagggccatgcgcaacattacagcc
gtggctggacgcaacaccttcatcaattgccgtgtgatcggctacccatactactccatc
aagtggtacaaagatggcatgctgttgccagacaaccatcggcaggtggtatatgagaat
ggtacgctcaagctcagtgatgtgcagaaaggaatggatgagggagcgtacctgtgcagt
gtactcatccaaccccaactctcgatcagccagaccgtctatgtcactgtcaaagttccc
cctctcattcagccttttgacttcccacctacttcaattggtaaactgatgtacatagca
tgtgtagtttcatctggggacatgcccatccggattacatggcgcaaagatggtcaggag
attgtgtctggcacctctggtgtcaccattgagaccaaggagttcatgagctcactgcag
atctccaaagtttccctaaagcacaatggcaactacacgtgcatcgccagcaacgatgca
gccaccgtcagctcagaaaggcaacttatagtcactgtcccccctcgtttccgagttcag
ccgaacaaccaggatgggatctatggaaagtctggggttctaaattgctctgtcgatggt
tacccccctcccaaagtcatgtggaaacatgccaaaggtattgtctcaggcattggaaac
ccacagcaataccatccagttcctctgactggccgcatccagatcatgcccaatggttct
cttctgatccgacatgttttggaggaggatcgtggctactatttgtgccaggccagtaat
ggtgtgggctcagatatcagcaagagcatgctgctgacagtcaaaatcccagccatgatc
acctcccatcctaacacaactatggctataaaaggacagaataaagaattaaactgcact
gcccggggtgagtaccctattatcattcgctgggaacgtggggacactgtcatcgaccct
gaccgtaaccctcgctactcaatcaccacgagccccaatgagaagagtgatgaggtgatt
tccacgctgaagctgaagccagctgagcgtggggactctgtgttcttctcatgtcatgct
atcaactcctatggcgagggccgtggcctcattcagttgactgtgcaagagccccctgat
cctccagagttagaagtacgtgaggtaaaagatcgcagtatgaacttaagatggacccag
aggtttgatgggaacagcatcattaccagttatgatattgaatacaaaaacaaatctgat
ccatgggaattaaagcatgctacacgcaaaatttccccgaccaataaccaggccaacatc
gtggagctgcatcctgcttcagtctacagcattcgtatgtactcatacaacaaaatcggc
cgtagtcaggccagcaaagagctcactatcagcacagaggaagcatctccagatgggcca
cccatcgatgtcattctgcagcctgtgacatcacagagcatccgtgttacatggaaggct
cccaagaaggaactccagaatggcgtaatccgtggctatcagattggctacagggagaat
gggcctggcagtaacggccagtacagtatagtggagatgaaggcaactggtgacagtgaa
gtgtatacgctggacaacctgaagaaatttgcccagtatggagtggttgttcaggccttc
aatcgagctggaacaggtccatccagttctgagatcaatgctaccacactagaagatgtg
cccagccagccacctcagaatgtgcgagccatcacagtaacatcagatgaggcagtgatt
acatggtcagagcctccacggatgaccctaaatggggtcttgaaaggttatcgcgtggtg
ttctggtccctcttccctgatggagaatggggtgagatgcagaacattacaacaatacgt
gagcaagtggagttgaaaggcttagaaaagttcacaaattacagcgtccaggtgttggcc
tacacgcaggcaggggacggtgtccgcagcaatgttctctacattcaaacgcgagaggac
ttccctggccctccagccggaatcaaagctgtcccctcctctgccagcagtgttgtggta
tcctggctccctccgaacaaaccaaatggcatcatcaggaaatacaccatttactgctcc
agccctggatcagctcaaccagctcctagtgaatatgaggcaaacccagaagtgctgttt
taccgcatcacccatctgaaccaaggacagcagtacctgatctgggcagcagctgttacc
actgcgggtcggggaaacatcagcgagaaggtcactgtggagcctgctttaaaggctcct
gctaagatcttatcttttggaggtacagttactactccatggatgaaggaggtacggctg
ccatgtagttcagttggggagccaactcccaccattaaatggaccaaagacagcgagaac
actgctattcccgtatctcaggatggccagcggaacattctggcaaacggaactctgttg
ttgcgctcagtaaaagcagaggattctgggtattacacctgcacagccaccaacacacta
ggattcgataccataattgtgaacctactagtgcaagtccctccagatcagccacgttta
acagtctccaccacctcaacctcctccattaccctggcctggattcctggagacaatgga
ggaagctccatcagaggctttgtgctgcagtactctgtggataatacagaagagtggaga
gatgtgttcattagctctactgagcgctcttttaagctggacaacctccgctgtggtacc
tggtataaggtcaaactagctgccaagaatagtgtgggagctggtaggataagtgaaatc
attgaggcaaagactcatggcagagagccacagttcaacaaggaccagcccctgctcacc
cacatcaactccacccatgctcggctcaacctgcagggctggagcagcggcggctgcccc
atcaacgctgtgctgcttgacttccggcccaaaggcacctatgcttggcaaagtgtacgc
accaatggcacaaccgatgtcttcctggctgatttgcgtgaagccacctggtatgagctg
aagatgaaggcctgcaacagtgctggctgtggcaatcagacctcccagtttgccacactg
gactacgatggcagtactattcccccaattaagtctgcacgtggggaaggtgatgatgta
aagaagctgttctccattggctgtccagtcattctagtcacattgggcatggctctcctc
ttcatcattcgaaagaaacgcaaagagaagaggctgaagagacttcgagatgcgaaaagt
ttggctgaaatgttaatcagtaagaacaatcgcagttttgacaccccagtgaaaggccca
ccccaggggccacggctgcacatagacataccacgtgtacaactgcttattgaagataag
gaaggcatcaagcagattggtgaagacaaagccaccatcccagtgacagacacagagttc
agccaatcagtaaaccctcagagcttctgcacaggagtgtctgtgcatcatcctgccctc
attcagaacactggccccttaattgacatgtctgatattcgaccaggaaccaatccagtg
tcaaggaagagtgtgaagtctgctcacagtacaaggaaccgttactcaagccagtggacc
ctgacaaagtgccaggcatccacacctgcccgcaccctaacctctgactggcgtaccgtc
ggctcccagcatggtatcactgtaacagagagcgacagttatagcgccagtctgtcccag
gacacggacaagggccgtaacagcatggtttcaacagagagtgcttcttctacatatgag
gaactggctcgcgcgtatgagcatgccaagctggaagagcacctgcagcatgccaagttt
gagatcacagagtgcttcatttcagacagttcttcagaccagatgaccacaggtaccaat
gaaaatgctgacagcatgacctcgatgagcacgccatcagagccaggcatctgccgcttc
acagcatctccaccaaaaccacaggactatgaccgtggcaagaatgtagcggtgccaatt
ccacaccgtgccaataagagtgagtactgtaatctccccctttatatgaagacagagcca
ttcttccgcaaacaagctgagctgcatgacccatgcccagtggtgccgccacgtgaagct
tctattcgaggtttggcggctcgtgcctaccacacacagggccgccacatgacattagac
ccctccaaacaacaggccctgacgctcagccacgggggcttaagtagcctaaccagctca
ggagcatcagggccagcctccagcaccaccacgggtggctccagcatcagctcgggcaca
tccacgttgccccagaggactcttaccatgcccagctcctcctccacctcctcagctggc
caaagcactggagctgctggagctgcagttggtgctgtggccagttctggctccacaggg
ggaggtggcgtgagcagtagctccaaggttggtggttcaagagactctctgctggagagc
agctcatctggattgggcagactgcagaagcagagtgctggggcgtattcaaagtcctac
acactggtgtag
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integrated database retrieval system
