KEGG   Neoarius graeffei (lesser salmon catfish): 132900570
Entry
132900570         CDS       T10798                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03050  Proteasome
ngra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    132900570 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    132900570 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngra03019]
    132900570 (sem1)
   04131 Membrane trafficking [BR:ngra04131]
    132900570 (sem1)
   03051 Proteasome [BR:ngra03051]
    132900570 (sem1)
   03400 DNA repair and recombination proteins [BR:ngra03400]
    132900570 (sem1)
Messenger RNA biogenesis [BR:ngra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     132900570 (sem1)
Membrane trafficking [BR:ngra04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    132900570 (sem1)
Proteasome [BR:ngra03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     132900570 (sem1)
DNA repair and recombination proteins [BR:ngra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     132900570 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 132900570
NCBI-ProteinID: XP_060798729
LinkDB
Position
16:28585975..28595457
AA seq 70 aa
MSEKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtctgagaagaaacaaactgtagatctgggtttgttggaggaagatgatgaatttgag
gaatttccagccgaagattggacaggcctggacgaagatgaggatgctcacgtgtgggaa
gataactgggacgacgataacgtagaggatgacttctccaatcagctgagagctgaactt
gagaagcatggatacaagatggagacgtcgtaa

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