Neoarius graeffei (lesser salmon catfish): 132900579
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Entry
132900579 CDS
T10798
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132900579 (vps50)
Membrane trafficking [BR:
ngra04131
]
Protein recycling
Others
EARP complex
132900579 (vps50)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
132900579
NCBI-ProteinID:
XP_060798737
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Position
16:complement(29674292..30132235)
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AA seq
987 aa
AA seq
DB search
MQKIKSLMARQGLKSPQETVADMSPVESFRVPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSIDMVQYELEKLPPDLNLQELEEYRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTTLQLAAVICTNARRQLAFAKEGFTEASLGLLSNQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTRVQLAYSLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYYRTMQWHEEHDKEEVKEADTD
ETSGEGSEESTVGHSYVKKKLEHGLSRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFS
ITQLHEFKFMGQCRSPSVSPSRQPASSDPDELSLFEQYIQGGNPFEMQIDNKDEESEDVL
ASNGYESEELEKSVYQDYDSDSDVADELKQDFVDEQTGDIPNKSVSRETLRSRKRSDYSL
NKINAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNEV
HAPSPSTPTSGSRPAASRPSCWYESSGLGLISSRLRTTLNRIQESLIDMEAGGENATSHG
PSEDRKEKVPSPHLSQLVVLTASSTLYGLAERVVATESLVFLAEQFELLQPHLDTMMPPA
KKPFLQQFYSQTVSTASELRKPTYWIVAAKAIDYEQMLLLMSGVKWDIKEIMSQHNVYVD
VLLKEFEEFNKRLGDVSKQVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALM
QLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVN
VCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaattaaatctttaatggcccgacagggcttgaaaagcccccaggagactgtg
gcagacatgagtcctgtagagagcttcagggtcccgagcaaggaggagctgagggagctc
agggagcagcccattgatccgcaggccgagcaggagatcatcgacagcatagaggaggtg
tacttctccaatgactccatcgacatggtgcagtacgaactcgagaaacttcccccagat
ctgaacttgcaggagctggaagagtacagagataagctgaagagacagcaagcagctgtt
tcaaaaaaagttgctgaccttattctagagaaacagccgtcctatgttaaggaactggag
cgggtaacatccttacaaaccacactgcaactggctgctgttatctgcaccaatgctcgg
aggcagcttgcttttgcgaaagaaggctttactgaagcaagtcttggactcctgtccaac
cagagacgcaggcagctgttaacaggattgttaaagtctttaaggaccataaagacactg
caaaggacagatgtcagactgagtgagatgctggaggaggaggactatccaggtgcaatc
cagttgtgcttggaatgtcagaaggctgccagcactttcaagcactacagctgcataagt
gaattgaactcgaagctgcaagacactctggaacaaatcgaggagcagctggatgtagcg
ctgtcgaaaacctgcaagcactttgacgtctctcactacaccagagttcaacttgcgtac
tcactattgggcaagacacagacagcgatggatcagcttcacatgcacttcacccaggct
attcacaacactgtgttccaggtggttttgggatatgtggagctgtgtgctggcaacgct
gacaccaaattccagaagatgcagtacaaggatctgtgcacgcacatcactccagacagc
tacatcccctgcctgactgacctgtgcaaagcattgtgggaagtgatgctcagttactac
cgaaccatgcagtggcatgaggagcacgacaaagaagaggtgaaggaggctgacacagat
gaaactagcggcgaaggctcagaggaatctacagtgggccacagttacgtgaagaaaaag
cttgaacatggcctaagccggatttggcaggacgtccagctgaaagtgaaagcctattta
ctggggacagacatgtccaacttcaagtatgacgacttcattgtggtgctggacgttatt
agcaggctcatgcaagtgggagaggagttctgtggcagcaagtctgaggtgctacaggag
tcaattaagaggcagagtgtgaactactttaagaactatcacagagcacgcttggaggag
ttgcgcatgtttctggagaacgaaacatgggagttgtgtcctgtgaagtccaacttcagt
atcactcagcttcatgagtttaagttcatgggtcagtgccgttcgccgtcggtgtctccg
agcaggcagccagcctccagcgaccctgacgagctgtctctctttgagcagtatattcag
ggaggaaaccctttcgagatgcagatcgacaataaagatgaggagagtgaagatgtcttg
gcgtccaatgggtacgagtctgaagagctggagaagagtgtgtatcaggactacgacagt
gacagtgatgtggcagatgaactgaagcaggactttgtggatgagcagactggagacata
cccaacaaaagcgtgtccagagagacactgcgcagcagaaaaagatctgactacagcctg
aacaagatcaatgcccccatcctgaccaacaccactcttaacgtgatccgtctggttggt
aaatacatgcagatgatgaacattttaaaacccatcgcctttgacgtcatccactgcgtg
tcacagctgttcgactattacctgtacgccgtgtacaccttcttcggccggaatgaagtg
cacgctccgtctccatccacacccacctcaggcagccgtccggccgcatcaagaccaagc
tgctggtatgaatcatctggactggggctgattagcagtagactgagaacgacactcaac
cgcatccaagagtctctcatagacatggaggcaggaggagagaacgcaaccagccatggc
ccctctgaggaccgaaaggagaaggtgccaagccctcacctgagccagctggtggttctg
acggccagtagcacgctgtatgggctggcggagcgcgtagtcgccacagagtcccttgtg
ttcctggctgagcagtttgagctcctccagcctcatctggacaccatgatgcctccagcc
aagaagccgttcctgcaacagttctactcccagacggtgtccacagccagcgagctccgt
aagcccacttactggatcgtggcagctaaagccattgattatgagcagatgctgctgctg
atgtcaggagtgaaatgggacattaaagagataatgtcacagcacaacgtctatgtggat
gtccttttaaaggaatttgaggaattcaataaaaggcttggtgatgtctccaaacaagtg
cggatccccctccctgtttcaaatgtcctctgggagcactgtatccgtctggctaaccga
acactagtggagggctatgctaatgtgaagaagtgcagtaacgagggccgagcactgatg
cagctggacttccagcagttcctcatgaaactggagaagctcaccgacctcagacccatc
cctgataaggagtttgtcgagacctacattaaagcctactacctgactgagaatgacatg
gagcagtttattaagaaccacagagaatactccatgaagcagctggccaacctggtcaac
gtctgcctcggctcccacatcaacaaaaaggcccgacagaaactccttgcagctattgat
gacattgaccgaccaaagagataa
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integrated database retrieval system
