Neoarius graeffei (lesser salmon catfish): 132900588
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Entry
132900588 CDS
T10798
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
132900588 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132900588 (pex1)
Membrane trafficking [BR:
ngra04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
132900588 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
nSTAND3
ABC_tran
AAA_14
AAA_22
AAA_28
AAA_18
RNA_helicase
TIP49
AAA_33
RuvB_N
AAA_5
Bac_DnaA
IstB_IS21
DUF815
NACHT
AAA_7
AAA_29
nSTAND_NTPase5
Parvo_NS1
AAA_23
nSTAND1
KTI12
FtsK_SpoIIIE
ORC-CDC6-like
Vps4_C
Motif
Other DBs
NCBI-GeneID:
132900588
NCBI-ProteinID:
XP_060798752
LinkDB
All DBs
Position
16:30502526..30531641
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AA seq
1262 aa
AA seq
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MLGSYGIHPVTLVFNNSKNCFLYLSPNLVSQLCLRENQVLELSWADGDKPVFLSWIRGSN
TLSSGQEDRAELSRHLGEKLGLHEGTQGFLRPCVQVQSVQQVFVEPLSSDDWEILELHYL
ALEQQLLDQIRVVFRDAVLPVWVDQHTVIYVKIVSVSPSVSYGRLEQFTELVVSPKLRPG
GKHLPHAPPDTESKNQLLQRQQNTELTSSSIISSAGTESPPESITNQPDYNQGHRGGMAD
LRSLLRYMFTGKYEPAKEIPEVPTIPAVFQDCVLRACGSPPAAISHLGSSHGDVHVFPWH
QSDCWSAGQPILTYGRLSKIHSPKEVREQTKQVMEKKKNGGSQTETDTDMQEHTEESVLV
KMICHNVKKLQLDQRSCKMGEIYHGKIWIPSMLRGRLSIDTHSAVKVRPLRCTPKVALAV
SLQPLHPLAESEREEDVQSAFLSWLHALSHQPLACLTTRTDLIVLRCTEGKSEFILTVLK
PEAEPKQVDEVFLLSTGALYKADIQVVREPHVSNHTTAQIADKSPCVGFPSLRSLGGVED
ISVCAFEHISHSLMGSPLSCELVSTGCGLRSGALLITGAKGSGKTSLAKALCMKAVEELD
AHIEVVDSKKLKGKRADTVRQRLDEVFEQAVWRQPSVVLLDDLDHMTGAATTPEQEQGAE
AVLHHHIAQSLKDLVDEVVGRSSLVTLLVTAQNEHTLHPILTEVQGSHFFQSFCKIHPPD
QMQRVAILRSLMTCKNIIIEDGSGIVDLDDIAMKTEGYLPRDLNLLLDRAIHASAVHNRG
NDNTQGMCLSSADLHHALQGFTPPSLWGVQLQVPSIAGMEQVGGLHEARQLLMDTILLPA
KYPLLFSSLPIRHRSGVLLYGAPGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQ
AVRNVFQRAQAAKPCILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVL
AATSRPDLIDPALLRPGRLDKTLYCPPPDLEARLEILKALTHAVPLAADVDLEQIAVATE
LYTGADLKGLLYNAQLEAIHSSLGPSLLADLGSGSDSEVSVSSLIFLNHSSGSDDSAGET
EAGMDTSAVALEHSEIPMEDLNHNIWRLYFGSSFELELGHHSPSELNSQCVSVPNSTTHE
LTGASARDVTFLRGPVLMSSVQQGFQELNPEQAERLRSDLNTIKSSYRRSPEDTSLGQTG
PIKPVVLICQSHLTSALANTRASVSRQDWRRYTELYESFGALREGKSQNAVLFTPGQRVT
LA
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgttaggcagctatggaattcatccagttacgttggtgtttaataactccaaaaactgc
tttctctacctgtcacccaacttagtctctcaactctgtctccgagagaaccaggtgttg
gagttgtcctgggctgatggtgataaacccgtgttcttaagctggatcagaggcagtaac
acattatcatcagggcaggaggatagggctgaactcagcagacatttgggagagaagctc
gggttacatgaaggaactcagggcttcctgaggccatgtgttcaggtccagtcagtgcag
caggtgtttgtggagcctctttcctcagatgactgggaaatcctggagcttcactacttg
gctcttgaacagcaacttttagatcagatccgagtggtcttcagggatgcggtgcttcct
gtgtgggtggaccaacacactgttatctatgtcaagatagtctccgtctctccgtctgtc
tcatacggccgattggagcagttcactgagctggtggtttcccccaaacttcgacctgga
ggcaagcaccttcctcatgctcccccagataccgaatcaaagaaccaacttctgcaaaga
cagcagaacactgaactcacttcctcatccattatctcctctgctggaaccgagtctcct
cccgagtccattaccaatcagccagattacaatcagggtcatcggggtggaatggctgat
ctgaggagtctgctaagatatatgttcacaggaaaatatgagcctgcgaaggagattcct
gaagttcctactatccctgctgtcttccaggattgtgtgcttcgggcgtgtggatcccca
ccagcagcaatcagtcatctcggttcaagtcatggagatgttcatgtattcccatggcac
cagtcagactgttggagtgcaggacagccgatattaacctacggtagactttcaaagatt
cattctcctaaagaagtgagggagcaaaccaagcaagtgatggagaagaaaaagaacggt
ggttctcagacagagaccgatacagatatgcaggagcacacagaagagtctgtgctggtt
aagatgatttgccacaatgtcaagaagctgcaactggatcagagatcctgtaaaatgggt
gaaatttatcatgggaagatttggatcccaagcatgttacgaggcaggttgagcatcgac
acacactctgctgtgaaagtccgtcctttgagatgtaccccgaaagtagcactagctgtt
tcgctccagccgttgcatccactggctgagagtgagagagaggaagatgttcagtctgct
ttcctcagctggcttcatgctctgagccatcagcctttagcatgtctgacaacacggact
gacctcatcgtcctgcgatgcactgaaggaaaatctgaattcatcttgactgtcctgaaa
cctgaagctgagccaaagcaagtggatgaggtctttctcttatccactggtgccctgtac
aaagccgacatacaggttgtcagggagcctcatgtgtcgaaccatacaaccgcacagatt
gcagataagtcaccttgtgttggctttccttccctccgctctcttggtggtgtggaggac
atcagtgtctgtgcttttgagcacatctctcacagtctgatgggaagtccactctcatgt
gagctggtatccactggctgtggcctccggagtggagctctgctcatcacaggagccaag
ggtagtggtaagacttctctagccaaggctctctgcatgaaagctgtggaagagctggat
gctcacatcgaggtcgtggactccaagaaacttaaaggtaaacgagcagacacagtgagg
cagagactggatgaggtttttgagcaagcagtttggagacagccatcagtggtcctgttg
gatgacctagatcacatgactggagcagccaccacgcctgagcaggagcagggcgcagag
gcagtgctgcatcatcacatcgcacagagcttgaaggatttggtggatgaagtggtggga
cgctccagtttggtgactctgctggtcacagcgcagaatgaacacactcttcacccaata
ctgactgaagtacagggttcacacttctttcagagcttttgtaaaattcacccacctgac
cagatgcagagagtggccatcctgaggtcactgatgacctgtaaaaacatcataattgaa
gacggctcaggaatcgttgatctggatgacatagctatgaaaactgagggctatcttcca
cgagatctgaacctactactagaccgagccatccatgccagtgctgtacacaataggggc
aacgacaacactcaaggaatgtgtttgagcagtgcggatttgcatcatgctctgcagggt
ttcacacctccttctctgtggggggtgcagctgcaggtgcccagcattgcggggatggag
caggtgggcgggcttcatgaggcacgccaacttcttatggacaccatcctacttcctgcc
aagtacccgctgctcttctccagtctgcctattcgtcatcgctctggtgtgctgctctat
ggagcacctggcacggggaaaaccctactggctggagctgttgccaaggagagtggcatg
aactttattagcattaagggaccggagctgctcagcaagtacattggtgctagtgagcag
gctgtgaggaacgtgtttcagagagcacaagcagctaagccctgtatccttttctttgat
gagtttgactccctggcaccacgcagaggacatgacagcacaggggtcactgaccgagtg
gtaaaccagctgctcacacagctggatggagtagaggggctgcagggagtgtacgtgctg
gcagccaccagtcgtcctgatctgatcgaccctgcactgctgaggcctggacggctggac
aagaccctgtactgccctcctccagacctggaagccaggctggagatactaaaggcgctg
actcacgctgtgccactggctgcagatgtggacttggagcagatcgctgttgccaccgag
ctgtacacaggagccgacctgaaaggcctgttatacaatgctcagctggaggccattcac
agcagtctgggacctagcttgctggctgatttgggctcaggatcagacagcgaggtaagc
gtctcatcgctgatcttcctgaaccacagcagtggctctgatgactctgcaggagagact
gaggctggcatggacacttctgcagtggcactggagcacagtgagattcccatggaagac
ttgaaccacaacatctggcgtctctactttggcagctcatttgaattagagctgggccac
cattcaccatctgagcttaattcacagtgcgtctctgtccccaactccaccacacatgag
ctgaccggtgcatcagcaagggacgtgactttcctccggggcccagtgctcatgtcctct
gtgcagcagggcttccaggaactgaaccctgaacaagctgagcgcctgagatctgatctc
aacaccatcaaaagcagctatcgcagaagcccagaggacaccagtttgggacagacaggt
cccattaaacctgtggttctgatatgtcagtctcacctcacatcagcactggctaacact
agagcctctgtcagtagacaggactggaggaggtatactgaactctacgagtcatttggg
gctttgagagaaggcaagtctcagaatgctgtgctgtttacaccaggacagcgagtaact
ctggcctaa
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integrated database retrieval system
