Neoarius graeffei (lesser salmon catfish): 132900632
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Entry
132900632 CDS
T10798
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03082
ATP-dependent chromatin remodeling
ngra03083
Polycomb repressive complex
ngra04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132900632 (rbbp4)
03083 Polycomb repressive complex
132900632 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
132900632 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132900632 (rbbp4)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
132900632 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
132900632 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
132900632 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
132900632 (rbbp4)
PRC2.2
132900632 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
132900632 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
132900632 (rbbp4)
Chromatin remodeling factors
NuRD complex
132900632 (rbbp4)
NuRF complex
132900632 (rbbp4)
NuRF complex (fruit fly)
132900632 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
132900632
NCBI-ProteinID:
XP_060798830
LinkDB
All DBs
Position
16:complement(35901664..35924635)
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaggaagctgcttttgatgatgcagttgaggagagggtgatcaacgaagag
tataagatatggaagaaaaacacacctttcctctacgacctggtgatgacccacgcactc
gagtggccaagtctcactgcacagtggcttcctgatgtcaccaggcctgaggggaaggac
tacagtgtccaccggctggtcctcggcacccacacctctgatgagcaaaaccacctggtc
attgccagcgttcagctgccgaatgatgatgcccagtttgatgcctcgcattacgacagt
gagaaaggggagtttggtggctttggatcagtgagtggcaagattgagattgagattaag
attaaccatgaaggagaagtgaaccgggcccgctacatgcctcagaacccctgcatcatt
gctaccaagactccaaccagtgatgtgctggtctttgattacaccaaacacccatccaaa
ccagacccctctggagaatgcactcctgacctgcgattgagaggacatcagaaagagggc
tatggtctgtcttggaaccccaacctaagcggctgcctgctcagtgcctctgatgatcat
acgatctgtctgtgggacatcagcacagtacccaaagaagggaagatagttgatgctaag
accattttcactggtcacacagctgtggtggaggatgtgtcctggcaccttttgcatgaa
tcgctctttggatcagtcgcagatgaccagaagctgatgatttgggatacacgttccaat
aacacatccaagcccagtcatgcagtggatgcacacactgcagaggtcaattgcctgtca
ttcaatccttacagtgagttcatcttggctactggatctgctgacaagactgttgccttg
tgggacctcagaaaccttaagctgaagctgcattccttcgagtcgcacaaagacgaaata
ttccaggttcagtggtcgcctcataacgagaccatcctggcctccagcggaacagacaga
cgtctcaatgtctgggacctcagtaaaattggtgaggagcagtcaccagaagatgcagaa
gatgggcctcctgaattactgttcatccatggtgggcacacagcaaagatctcagacttc
tcctggaaccccaatgagccatgggtgatctgctctgtgtctgaggacaacatcatgcaa
gtctggcagatggcagagaacatctacaatgatgaggaccctgaaggagcagcagacaca
gaggtccagggatga
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