Neoarius graeffei (lesser salmon catfish): 132900711
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Entry
132900711 CDS
T10798
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132900711 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132900711 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132900711 (vps28)
Membrane trafficking [BR:
ngra04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
132900711 (vps28)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132900711 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
132900711 (vps28)
Exosomal proteins of colorectal cancer cells
132900711 (vps28)
Exosomal proteins of bladder cancer cells
132900711 (vps28)
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Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
132900711
NCBI-ProteinID:
XP_060798953
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All DBs
Position
16:41717621..41735039
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AA seq
223 aa
AA seq
DB search
MFHGIPASGGMGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTGACSRLLVQYKAAFKQVQASDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VNLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatggaatacctgcttcaggagggatgggaggcgctccagccaataagcctgaa
ttgtatgaggaagtgaaactgtacaaaaacgccagggaacgggaaaagtatgacaacatg
gctgagctgttcgctgtggtaaagaccctccaagcgttagagaaagcgtacattaaggac
tgcgtgactcccaatgagtacacgggcgcctgctccagattgcttgtgcagtacaaagct
gctttcaaacaggtccaggcatcagatgttggctcaatcgatgacttttgtaggaaatac
aggctcgactgtccactagcgatggagagaataaaagaagaccgcccaatcaccataaag
gatgacaagggcaatctgaatcgctgcattgcggatattgtatctctcttcatcacggtc
atggataaactgaggctggagattcgagccatggatgagatccagccagaccttcgggaa
ctgatggagacgatgaacagaatgagcaacatgccaccagattcagaggccaaagacaaa
gtcaatctttggttgactacactgagcagcatgtctgcctctgatgagctggatgactcc
caagttcgccagatgctttttgacctggagtctgcctacaatgccttcaaccggttctta
cactcgtcctaa
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