Neoarius graeffei (lesser salmon catfish): 132900744
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Entry
132900744 CDS
T10798
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04010
MAPK signaling pathway
ngra04020
Calcium signaling pathway
Brite
Ion channels [BR:
ngra04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132900744 (cacna1ha)
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GFIT
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NCBI-GeneID:
132900744
NCBI-ProteinID:
XP_060799000
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Position
16:43712113..43832172
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AA seq
2197 aa
AA seq
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MFTWFEHVSMLVILLNCVTLGMFQPCEDVTCQSQWCLILQAFDDCIFAFFAVEMVIKMMA
LGIFGSKCYLGDTWNRLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMR
ILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDNNAKELYNLSFMSP
YYMHEDGEESPFICSMINNGMLKCTDVPHYKEGEMECNLNVSLGQTFSSPDARNGCVNWN
QYYSVCQPGDHNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFIL
LIIVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYMSNDSTLASYSEPGSCYEEML
RYISHLYRKVKRRAHRIYHGWQSKRRKKVNPNSGGLPGGEGANGHGRQKSGGHWARSVHN
LVQHHQHHHCHLSNGSPSPQAIAESTDVLEMRFITSGVQLAVPSQSPAGLDFSPGHQSVH
SIFQGDFHEAQQICTGNTAGVNPLGRLNGGMNYPTILPSFICSYTGSTVTAKGRIEANNS
TADMVDPFEKLQHLTGEHSHRRLMLQMAGVEPSSLLFEVLGCPYCAQALENIDLDLADSD
CSQSEGEVVHEFSHRARFRLGHLHHHKRLEERSRLIQCWEDFRDRMKRIVDSKYFNRGIM
IAILINTLSMGIEYHEQPDELTDVLEISNIVFTSMFVLEMIFKLMAFGIFGYIKNPYNIF
DGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCM
LLMLFIFTFSILGMHLFGCKFSLKLENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVL
YNGMASTSPLAALYFVALMSFGNYVLFNLLVAILVEGFQAEGDATKSDADEEKRSVNFEE
EEKMGELRATELKMYSLMMSANGHVDSRGNLPPPIIMRTDATPMPTPKSSLGTDSIFSLE
ESRRGSGISIDPIAYDQRSLASPRKSPCHPCSSGSNWGSRRSSWNGLSRAPSLKRKDTSG
ERESLLSGEGRGSFEDEEPEGIILGKARSASGGSLHHPGSLDFPELPTLPSLCPSGEHHD
CNGRALHLSTELPSELSREDSPTEEDLDDSFSFRLKRMLDAYKPKWCKSHEEWSLYIFSP
RNRFRMFCQRIISHKMFDHVVLVFIFLNCITIALERPHIQSNSPERLFLSISNYVFTVIF
VAEMTVKVVALGFYSGKHSYLQSTWNMLDGVLVFVSLIDILVSLASTSGNKIFGILRVLR
LLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHC
EGLDTRNITNKSDCLHANYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGV
DQQPVVNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQR
LLEKRRRKAQQRPYYADYSPARLYIHTLCTNHYLDLFITFIICINVVTMSIEHYDQPKYL
EEALKYCNYVFTVFFVLEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNA
ALPINPTIIRIMRVLRIARVLKLLKLATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAA
LGVELFGKLECTDSNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECTPED
KQCLSYLPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEME
MARRLSNVSAMSSGGPHSPGQDERMQRTQENLLSPRKMSVSRMHSLPNDSYMFRPVRPAS
APYPLQEVEPTQAYLELGSVTSIHSQPCEGHSLLQVPGVHPQPHISICMPRIPTPKSSPL
HAVGRPLRRQEAIKNDSIDVRMYDSKGHMDKHIRSTRASITLPVPRISTPSSPLVSPFLP
PYCHMPSACTLQHPHHQRIIAPRPSSPTSSSPSNSMLDSADPADEEVHYINSSARLWAGV
PAEGRCHSLSPYVTPWPLPVKNCTSATNLTDYSTKEKFFSVDKRGFLDKPSGSEDHRRHS
IEICSSVDNNAFEQGVGEKRHLPTRGQSLHIPRKKKMSPPCISVERPIEIELPPSLASMK
KLSESTLLRRRTPSYELALQRDSLDYLEHQISSQPLIKVERQPSHCGEYLSLPRFPFHQS
VSSSCILRESSPSAQPPRYDGALEESTDFSTVNRTAQ
NT seq
6594 nt
NT seq
+upstream
nt +downstream
nt
atgttcacctggtttgagcatgtcagcatgctggttatacttctgaactgtgtgaccctg
ggcatgttccagccctgtgaggacgtcacatgccagtctcagtggtgtctcatcctccag
gcatttgacgactgcatctttgctttcttcgctgtggagatggttatcaaaatgatggct
ctggggatttttggatctaagtgttaccttggagacacatggaatcgcctggacttcttc
attgtcatggctgggatgatggagtactcactggatggtcacaatgccagcctgtcagcc
atccggactgtgcgtgtgctcaggcctctacgagccatcaacagagtccctagtatgagg
atactggtgactctgctcctagatactctgcctatgttaggcaatgtcctcctgctgtgc
ttttttgtgttctttatattcggcattgttggggtgcagctctgggctggtcttctgagg
aacaggtgtttcctggacaacaatgcaaaggaattgtataatctgtccttcatgagtcca
tattacatgcatgaggatggggaggagagcccatttatctgctccatgataaataatggc
atgctcaagtgcactgacgtgccccattacaaagagggtgagatggagtgcaatctaaat
gtatcccttggacagaccttcagtagccctgatgccaggaacggctgcgtgaattggaac
cagtactacagtgtttgtcagcccggggatcacaaccctcacaaaggggctgtgaacttt
gacaatattggatatgcatggattgctattttccaggttatcactttggagggatgggta
gacatcatgtattatgttatggatgcccattccttttacaattttatatattttatattg
cttattatagtggggtctttcttcatgatcaatttgtgcctggttgtgatcgcaacccag
ttctcggaaactaagcagcgagagaaccaactgatgcaggagcagcgtgcgcgctacatg
tccaatgacagcacactggccagctactcggagcctggcagctgttacgaggagatgctc
aggtacatcagccacctgtaccgcaaggtgaagcgccgcgcacaccggatctaccatggc
tggcagagcaagcgcaggaagaaggtcaaccccaacagcggcggcttgccagggggtgaa
ggggccaacgggcacggcaggcagaagagtggtgggcattgggcacgttctgtccataat
cttgtccagcaccaccaacaccaccactgtcaccttagcaacggcagcccaagccctcag
gccatagcagagagtaccgatgttctggagatgaggtttatcacgtcaggagtacagctg
gcagtgccctcacagtcacctgctgggttggatttttcaccaggacaccagtcagtacat
agcatctttcaaggtgactttcatgaggcccagcagatttgcacaggcaacacagctggt
gtgaatcctctggggagacttaatgggggtatgaactatcctaccattttgccatccttc
atctgcagctatacaggcagcactgtcacagctaaaggtagaatcgaggccaacaatagc
acagcagatatggtggatccgtttgagaaactacagcatctcacaggagagcacagccac
agacgtttgatgctgcagatggcaggcgtagagccgtcttccctgctctttgaggttctt
gggtgcccatactgtgcccaggctctggagaacattgacctagacttggctgactctgat
tgctcccagtccgaaggtgaggtggtgcatgagttttcccacagagcaaggtttagactc
ggacacttgcatcaccacaagaggcttgaggagcgcagccgattgatacagtgctgggag
gacttcagagacagaatgaaacgcatagtggacagcaagtactttaaccgtgggattatg
atcgccatcctgatcaacacattgagcatgggaatagagtatcatgagcagcctgacgaa
ctgacagatgttctggagattagcaatattgtcttcaccagcatgtttgttcttgagatg
atcttcaagctgatggcctttggcatctttggctacatcaaaaacccatataatatcttt
gatgggatcatcgttgttataagcgtatgggagattatcggacaggctgatgggggtctt
tccgtgctcaggacttttcgtctcttgcgtgtgctcaagctggtgcgctttctgccagct
ctgcggagacagctggtggtcctgatgaagacaatggataatgtggccaccttctgtatg
ctgctcatgctcttcatcttcaccttcagtattctcggaatgcatctgtttggctgcaaa
ttcagcctgaagttggagaatggagataccatcccagacaggaagaacttcgactctctg
ctgtgggccatcgtcactgtgtttcagatactaactcaggaggattggaatgtagtcctc
tataatggaatggcttccacctctccattggctgcactttacttcgtggccctgatgagc
ttcgggaattatgtcctatttaaccttctggtagccatcttggtggagggctttcaagca
gagggagatgccaccaagtctgatgcagatgaggagaagaggtcagttaattttgaagaa
gaggagaagatgggagaattacgtgccacagagttgaagatgtactctctgatgatgtct
gcaaatgggcatgtggactctcgtggtaatttgcctccaccgatcatcatgcgcacagac
gcaactcctatgcccacaccaaagagttctcttggcacagactccatcttcagtttagag
gagtcaagacgtggtagtgggatttctattgatccaattgcttatgatcagagatcactg
gcaagcccacgcaaatcaccctgtcacccatgtagttcaggcagtaactggggcagccgc
aggtcaagctggaacggcttgagtcgagccccaagtctaaagaggaaggatacatctggc
gagagagagtctctactctcgggtgaaggcagaggcagctttgaggatgaggaaccagaa
ggaataattttgggaaaagccaggagtgccagtggtggctctctgcaccatccaggttct
ctggatttccctgagctgcccacactccccagcctgtgcccatcaggagagcaccatgac
tgcaatggcagggcattacacctgtccacagagctgccctcagagctgagccgtgaggac
tcccccacagaggaggatctagacgatagtttcagttttcgtctgaagaggatgctagat
gcatacaaacccaagtggtgtaaaagtcatgaggaatggtctctctatatattctctcca
cggaacaggtttcgcatgttctgccagaggatcatctcacacaagatgtttgaccatgtg
gtcttagtctttatcttccttaattgcatcactattgctctggagagaccacacattcag
tccaatagcccagagcgattgttcctcagtatttccaattatgtattcactgtgatattt
gttgctgaaatgactgtgaaggtggtggctcttggcttctattcaggaaagcatagttat
ctgcagagcacctggaacatgttggatggagtgttggtgtttgtttcgctcattgacatc
ttggtgtctctggcatccaccagtgggaacaagatctttggcattctgagggttctacgt
ctgctaaggacgctgaggcctttaagagtgatcagtcgtgctcctggactgaagctggtg
gttgaaaccttgataacatcattgaggcccatcgggaacatagtactgatctgctgtgct
ttcttcattgtctttggcattcttggagttcagctctttaaaggcaagttttaccactgt
gaaggtttggacacaagaaacatcacaaataaatcagattgcctacatgccaactacaaa
tggattcggagaaagtacaactttgataatttggggcaggctctcatgtcgctgtttgtg
ctatcttgtaaggacggctgggtgaatattatgtatgatggtctggatgctgtaggtgtc
gaccaacagccggtagtcaaccacaatccctggatgctgctttatttcatctccttcttg
ctgattgtgagcttcttcgtgctgaacatgttcgtgggagtggtggtggagaacttccac
aaatgtcggcaggaccaggaagaagaggaggcgcgcctgcgtgaggagaagaggcagcgg
ttgctggagaaaaggcgcaggaaagcacagcagcggccctactacgcagattactcacca
gcccggctctacatccacacactgtgcactaaccactacctggacctctttatcaccttc
atcatctgcatcaacgtggtcaccatgtccatagagcactacgaccagcctaagtatcta
gaggaagcgttgaagtactgcaactatgtcttcaccgtcttcttcgtcttagaggccctt
cttaaacttgtggcttttggcttccgaagattcttcaaagacaggtggaaccagttagat
ctagccattgtgcttctctccatcatgggcatcacgctggaggagattgagatgaacgct
gcccttccaatcaaccccactatcatccgtatcatgagggttttgagaatagctcgagtg
ttgaagcttttgaaattggctacaggcatgagagcattgctggacactgtgatgcaggct
ctaccacaggttgggaatctgggcttgctgtttatgcttctctttttcatttatgctgca
ctcggcgtagagctctttgggaaactggaatgcactgacagtaacccatgtgaaggtctc
agtcgacatgccacatttgagaactttgggatggcctttctaaccctcttcagagtttca
actggtgacaactggaacggtataatgaaggacactttaagggagtgcacaccagaagat
aagcaatgcctgagctacctgcccttggtatcccctatatactttgtcacctttgtgctg
atggcccagtttgttctggtaaacgtggtggtggctgtgttgatgaagcacctggaagag
agcaataaggaggccaaggaggatgctgagatggatgcagagattgagatggagatggaa
atggcccggcgtctcagtaacgtctcagcaatgagctctggtgggccacattcacctggc
caggatgagcgaatgcagagaacgcaggagaatttgctctctccacgaaagatgtcagtg
tccaggatgcactctttgcctaatgacagttacatgtttcgcccggtgaggccagccagc
gcaccataccctctgcaggaagtggagccaactcaagcatacctcgaattaggctcagtg
acctcgatccactcacagccatgtgaaggtcattccttgctccaggttcctggtgttcat
cctcagcctcatattagtatttgcatgcctaggattcccactccaaagtcatctcccttg
catgctgtaggcaggcctctacgtagacaggaagcaatcaagaatgactcaattgatgtg
cgaatgtatgactccaaaggccacatggacaaacatattaggagtacaagagccagcatc
accctcccggtgccgcggatctccacccccagcagccccctggtgtctcctttcctaccc
ccttattgccacatgcccagtgcctgcaccctccaacaccctcaccaccagagaattatt
gccccccgaccatccagtccgaccagcagcagccccagcaactccatgttagactcggcc
gacccagccgatgaggaggtgcactatatcaacagctcagccaggctgtgggcaggagtc
ccagcagagggccggtgccactcactgtctccctatgtcacaccatggccgctgcctgtg
aagaactgtaccagtgccaccaatcttaccgactacagcactaaagaaaagttcttcagt
gtggacaagaggggatttttagacaagccctctggttctgaggatcatcggcggcactcc
attgagatttgctcttctgtggacaacaatgcatttgagcagggagttggtgaaaagagg
cacctgcccacacgtggacaatcattgcacatccccagaaagaagaaaatgagtcctcct
tgtatctctgttgaacgcccaatagaaatagaactccccccgtctcttgcgtccatgaaa
aagctgtctgagagcacgctactgcggcgaaggacgccatcttatgaactggcactacag
cgtgactctctagactacctggagcaccaaatctccagtcagcctctcatcaaagtggag
aggcagccctcacactgtggtgaatatctctctctcccacggttcccctttcaccagtca
gtctccagttcctgcatcctgcgtgaaagcagcccatccgcacagccccctcgctatgac
ggtgcactggaggagtccacagatttcagcacagtaaacaggactgctcagtga
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