Neoarius graeffei (lesser salmon catfish): 132900768
Help
Entry
132900768 CDS
T10798
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04120
Ubiquitin mediated proteolysis
ngra04137
Mitophagy - animal
ngra04144
Endocytosis
ngra04340
Hedgehog signaling pathway
ngra04350
TGF-beta signaling pathway
ngra04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132900768 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132900768 (smurf1)
04350 TGF-beta signaling pathway
132900768 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132900768 (smurf1)
04137 Mitophagy - animal
132900768 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
132900768 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132900768 (smurf1)
04121 Ubiquitin system [BR:
ngra04121
]
132900768 (smurf1)
03029 Mitochondrial biogenesis [BR:
ngra03029
]
132900768 (smurf1)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132900768 (smurf1)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
132900768 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
132900768 (smurf1)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
HECT type E3
132900768 (smurf1)
Mitochondrial biogenesis [BR:
ngra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
132900768 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
132900768
NCBI-ProteinID:
XP_060799028
LinkDB
All DBs
Position
16:complement(44720528..44860664)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTIKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNASDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENEGPVFEDSGPGRPLSCFMEEPL
PYSDPTGAAGGGNCRALESPNQEQRLQTQRIRNQESRSHAHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQQSQVKESSQALPVQMDVPVEEGEGELPVRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLSDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGRNIPVTEENKREYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDHK
ELELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccctgggactcggaggaacgggtcaagcatcaaaatcagactgacagtgtta
tgtgccaagaatctagcaaagaaagacttcttccgattgcctgatccttttgccaaagtg
gtcgtcgatggctcaggccagtgtcactcgacagacaccattaagagcacgctggacccg
aagtggaaccagcattatgatctatatattgggaaaaccgactcgatcactatcagcgtg
tggaaccataagaagatccacaagaagcagggcgctggttttctgggctgtgtgaggctc
ctgtccaatgccatcagcagactcaaagatacaggataccagcgcttggatttatgcaag
ctgaacgcctcagacagcgacgccgtgaggggtcaaatagtcgtgagcctccagacccgt
gataggattggcagtggcgggcctgtggtagactgtcgaggactgttagaaaatgaaggg
ccagtctttgaggactctggaccaggacggcctctcagctgtttcatggaggagcctctg
ccctactcggatcccacaggggctgctggtgggggcaactgtcgtgctttggagtcacct
aatcaagagcagaggcttcaaacccagagaatccgaaaccaggagtctagaagtcatgcg
cataccccacagaaccggccacatgggcaccagtcaccagacctcccagaaggctatgag
cagaggaccactgtgcagggacaggtctattttctacacacacagactggcgtcagcact
tggcacgatcccagaataccacgggacctgaacagcgtaagctgtgaggagctcggccct
ctgccgcccggctgggagatccggagcacggtgtcaggaaggatttattttgttgaccac
aataacagaaccacacaattcacagaccccagattacaccacatcatgagccaacagtct
caggtgaaggagtcgagccaggccctgccagtgcagatggatgttcctgtggaggagggt
gaaggagagctgcctgtgcgttatgagagagatctcgtccagaagctcaaggtgctccgc
cacgagctctcgctgcagcagcctcaggccggacactgccgcatagaggtgtcccgtgaa
gagatctttgaggagtcttaccgtcagatcatgaagatgaggccgaaggacctgaagaag
aggctaatggttaaattccgtggagaagagggcttagattatggtggcgtggcaagggag
tggttgtacctcctatgtcacgagatgcttaacccatactacggcctgttccagtactcc
acagataacatctacacactgcagatcaaccccgattcgtccatcaaccctgatcattta
tcgtacttccactttgtggggaggatcatgggccttgctgtgtttcatgggcactacata
aacggaggcttcacgctgcccttctacaagcagctcctggggaaacccatccagctttct
gacctggagactgtagaccccgagctccacaagagcctcgtctggattctagaaaatgac
atcacatctgttctggatcatactttctgcgtagaacacaacgctttcggcaaattcctc
cagcatgagcttaagcccaacggcagaaacatcccagtgacggaggagaataaaagggag
tatgtgaggctctacgtgaactggaggttcatgcgaggcattgaggcccagttcctcgct
ctgcagaagggcttcaatgagctcatcccacagcacctcctcaaaccttttgaccacaag
gaactcgagctaatcatcgggggacttgggaagattgatttgaacgactggaaggccaat
acgcggctaaagcactgtgtggctgacagtaacatcgtcaagtggttttggcaagcggtg
gaatcattcgatgaggagaggaggggaagactgctccagttcgtcaccggctccacacgc
gtccctcttcaaggctttaaagcactgcaaggttctacaggttctgcaggaccaaggctc
tttactatccatttgattgatgccaatacggataatttgcccaaagcccatacatgcttc
aaccgcatcgacatcccgccttacgagtcgtacgagaagctctacgagaagctcctgact
gccgtcgaggagacatgtggctttgctgtggagtga
DBGET
integrated database retrieval system
