Neoarius graeffei (lesser salmon catfish): 132900829
Help
Entry
132900829 CDS
T10798
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04120
Ubiquitin mediated proteolysis
ngra04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132900829 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132900829 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132900829 (mgrn1b)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132900829 (mgrn1b)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132900829 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
132900829
NCBI-ProteinID:
XP_060799123
LinkDB
All DBs
Position
16:51740922..51775595
Genome browser
AA seq
539 aa
AA seq
DB search
MGSVLGRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDGDTPTEEGAKPKSLYGV
EFTFDSDARVAITIYCQAFEEFSNGMAVYNPKSPAMVSETVHYKRGVSQQFSLPSFKISF
SDWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSMDHDEHSSSDSVPP
GFEPISLLEALNGLTAMSPGVPSAPLYDEINFSGSLSGDSRQLSSPEHSGESSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQAHTLLSSSPAPTEGTGAEDAPDSLSPEDEDR
VNSEGEMMADCISERSSLTKAESDPPGFSGSMESLITRSTSCSSQPLLCPMSTLHMEDE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggtactgggccgaaggatcgccggtgtggaggatatcgatattcaggcgaat
tctgcctacagatttcctccaaaatctgggaattactttgcgagtcacttcttcatggga
ggagagaagtttgacacccctcaccctgaaggttatctgttcggtgagaacatggatctc
aatttcctcggaaaccgtccagtacagtttccgtatgtgaccccggcaccacacgagcct
gtgaagactttgagaagccttgtcaacataaggaaggactccttgcgactcgtcagatat
aaagatgatggtgatacacctactgaggaaggagcgaaacctaagtctttatacggggtg
gagttcacctttgactcggatgcccgagtggccatcactatctactgccaggcgtttgag
gaattctccaatggaatggcagtttataatcccaagagtcctgctatggtgtctgaaact
gtgcactacaagcgaggagtgagccagcagttctccttaccctccttcaagatcagtttt
tctgattggaaagaggaagacctgaactttgatctggacagaggtgtttttcccatggtc
atccaggcagtagtggatgaaggagatgattgtttgggacatgcacatgtgctgttggct
gcctttgagagacatgttgatggcagcttctcagtgaagcctctaaagcagaaacaaatt
gtggatcgggttagttacctgctccaagagatctatggcattgaaaataagaacaaccag
gagacaaagccttctgatgatgagaacagtgacaacagtaacgagtgtgtggtgtgtctg
tcagacctacgggacacactcatcctgccttgtagacatctgtgtctttgtaactcatgt
gcagatacactacgctaccaggccaacaactgccccatctgcagactaccatttcgtgcc
ctgctgcagatcagagcagtgaggaagaagcctggcgcgctctctcccgtctccttcagc
cctgttctggctcagagcatggaccatgatgagcactcgagctctgactcggttccccct
ggctttgagcccatttccctgttggaggctctcaatggcctcactgccatgtcccctggt
gtgccatcagcccctctgtacgatgagatcaacttttcaggcagcctgagtggggacagc
aggcagctgagctctcctgagcactctggagaaagcagccttcaaaagggcaaagtcagc
aagtcacctgacagcacgctacgctcaccttcgtcacctattcaggaggaggatgaggag
aagctgtcggagatgtctgatgcacaggcccacaccctgctgtccagcagtccagctccg
accgagggtactggggcagaggatgcgcctgactctctatctccagaagacgaggacagg
gtgaattctgagggagagatgatggctgactgcatcagcgagcgcagcagcctgaccaaa
gcggagagcgacccaccaggtttctcaggctccatggagagtttgattactcggagcaca
agctgctctagccagccactgctctgtcccatgagcactttgcacatggaggatgaataa
DBGET
integrated database retrieval system
