Neoarius graeffei (lesser salmon catfish): 132900930
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Entry
132900930 CDS
T10798
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04010
MAPK signaling pathway
ngra04020
Calcium signaling pathway
ngra04510
Focal adhesion
ngra04540
Gap junction
ngra04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132900930 (pdgfd)
04020 Calcium signaling pathway
132900930 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132900930 (pdgfd)
04540 Gap junction
132900930 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
132900930 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ngra04052
]
132900930 (pdgfd)
Cytokines and neuropeptides [BR:
ngra04052
]
Cytokines
Growth factors (RTK binding)
132900930 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
DUF6980
Motif
Other DBs
NCBI-GeneID:
132900930
NCBI-ProteinID:
XP_060799301
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All DBs
Position
16:complement(61064716..61086033)
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AA seq
363 aa
AA seq
DB search
MRSVMTVLMWRPARLLALCWLVLVGARGAQVRADRSPRVPSMRRDDLFRRDEVIKVTTSG
QIQSPRYPNAYPHNLLLSWKLLAPPFTRVLLEFDGRFGLEAPVNNICRHDFVKIDDISES
STITWGPWCGRKAPNPITSKNNMIRITFKSNDFCVAKPGFKLCYSLLVDAPPSYLNILDA
VTVVSDDVPVSNDPLSADTLDDIIAGFSTVEEVLRHLNPNTWRQDLDSIYTNAQTQQYIP
RSYHANRANKLDLDRLYEDVRLYSCTPRNFSINLREELKVTNAVFFPRCLLVKRCGGNCA
CGTQQWNSCTCSPAKTVSKLHEVLMFSPGPNFYRKTKATWTVKEINLQHHEQCECVCHSR
PPR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcggtgatgacggtgctgatgtggaggcccgcgcgcctgctcgcgctctgttgg
ctcgtgctggtgggcgcgcgcggggctcaggtgcgagccgacagatcgccgcgcgtgccg
agcatgcgccgtgacgatttgttccgccgggatgaggtcatcaaggtgacaacaagcggc
cagatccagagcccacgatacccaaatgcatacccgcacaacctcctgctgtcatggaaa
ctgctggctccacccttcacgcgtgttttgctggagtttgatgggaggtttggtttggag
gcgcctgtgaataacatttgcagacatgattttgtgaagattgatgacatttcagaaagt
agcaccatcacctggggtccctggtgtggacggaaagccccgaatcccatcacgtccaaa
aacaacatgatcagaatcacgttcaaatctaatgacttctgtgttgccaagccaggattc
aaactctgctactccctgctggttgatgctcctccatcttatttgaatatcttagatgct
gtcacagttgtgtcggatgatgtgcctgtctctaatgatccattatcagctgatactttg
gatgatatcattgcggggttcagtacagtggaggaggttcttagacacctgaacccaaac
acttggagacaggacctggactctatttacacaaatgcacagacacaacagtacatacca
cggagctaccatgccaaccgtgcaaacaaacttgatctggatcgtctgtatgaggacgtg
aggctgtacagctgcacaccacgcaatttttccataaatctgcgagaagaactgaaggtc
accaatgctgtgtttttcccacgatgtctcttggtgaagcgctgtggtgggaactgtgct
tgtgggacacaacagtggaactcctgcacctgtagccctgccaaaacagtcagcaagctc
catgaggtgctgatgttctctccaggaccaaatttctacaggaaaaccaaagcaacctgg
actgtcaaggaaatcaacctgcagcatcatgagcaatgcgagtgtgtgtgtcactctcgg
ccacctcgatga
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