Neoarius graeffei (lesser salmon catfish): 132900994
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Entry
132900994 CDS
T10798
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132900994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132900994
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
132900994
Endosome - Golgi transport
Arf GTPase associated proteins
132900994
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
132900994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_8
SOS1_NGEF_PH
PH_3
PH_6
PH_9
Motif
Other DBs
NCBI-GeneID:
132900994
NCBI-ProteinID:
XP_060799400
LinkDB
All DBs
Position
16:complement(71573421..71818614)
Genome browser
AA seq
1552 aa
AA seq
DB search
MLSPTAEGSQSIHEWLGGLRLEQYSPTFQEVGLGTVWECRELTACQLERMGVALSGHRKR
ILLSLQKLFPSERGISGEEEDEGHKPIPKERTKFRTFAGTDSGVNSDQKQNLPTNNSVTH
KKGPPPIPPRATQNCPPVPFLTVSVTAAVTAEDVSVTPSDLASVPLTKVTQPRPVPTPVP
VPVRPQPRNLPLAPRRQTGDRKPSPVSPSAVSPLHVSPSCSSASPAEQFHLYEQCSSPGH
AELGVPPLPPKSYAVVTPREPKVTPPARPPRRPPIPPRNTMATTNKTTPLPRSPTALSSS
PADDLCGLDVTAQIKPCIETSQLGAVLAPCRRRLDSTGSSDSYEELNMAKCADGDPIEMS
DKNMLQPLPRVRKSRHSSLYSDDELLDEDDDSVAEKRHSWIEDYSQISSSQNSIYLPTTA
LPPKDDSTPQLTPVIKMGWLDKNPPQGSLIYQRRWVKLDADYLRYFDNDKDVYSKRLIPT
SSITTVTSVGDQKFEVVTHNRTFLFRAESDLERNDWVMVLQDIISSSRLKPSSELTLNLY
ATAEMKGYLEVRGLRSKLYTTVCGDKVFLYKNAEDYKLGIGITAIDMNVGNVKDMDRRAF
DLTTPYRVFSFVAETDQLKDQWMEAMRNSIAEALSNYEVAEKIWAEPANQDCADCCATKP
EWAAINLGVVFCKRCAGEHRSLGPSISKVRSLKMDRKVWTDDLIQLFLEVGNERANQFWA
ANIPPSEALTPLSSSDERRRFITAKYREGKYRRYHPLFGNQKELDNALCINVQSNDVCET
LALIFCGADVNCDTGIPEFPTPAALALHYGQKLQVEFLTQNRNIEIPRSEVKLAMHTEHY
MAPPSITHNGFLFKIASMARPITERKNKEEFSRRWCVLNDGHFNYYESDKNATPNGGLKM
KEIVCLAVNPPETHGYDHSFEIYSDAERLYLFGTDSPDSMKEWVKSIAKSFIPACAEDLL
QKDFERIGRLRYKDPLNLESWRPGWFCLEASTLHVCLEDSQSRESIQLQKLLELSRDNEV
LVLVERGRTLYIEGERKLDFHGWASAIQRAAGSSGDNLSQQQLTEADIPLIVERCIHYVT
QYGLASEGIYRKSGVNSKIASLLDTFRNDARSVWLKEGEHQVDDVSNVLKRFFRDIEEGL
FGPQSHNWLSTTALSDESRKISQYRLLFENLPRVNKATLRTLVNHLYCVQRFSELNHMNL
HNLAIVFGPTLFQTDGQDYNAGRVVEDLIQHYITIFSVNEQQLKKQLDEITFIIKLRENL
NSIPGPASGDFICTVYLEEKKEMAEQHVKIPATMTAAELAFEILDRRKISIKEKDYWCCF
EINEKEETERPLHYQEKVLPILHSLGTDSHLLIKKHYSMEAMLIYLASKVDVTKHGMLKF
REERSLLGLSTGSFNDRYFMLNQTSLRLYKDVRNLHKDQLLLCSNRAEKEWPVKCLKVYX
GIKKKLRPPTCWGLTVVYESEKPEKQDKQQWYLCCDTQTEMREWLATFLSIQHAGVLWPA
EWLKSRPVTRSSPPLDSRLGSVSLIPLRGTESEMRNSVAAFSADPLALLRNL
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctcccacagcagaaggctcgcagtccattcacgagtggcttggggggctccgc
cttgagcagtacagtcccaccttccaggaggttggtctcggaactgtatgggaatgccgg
gagctgactgcctgtcagctggagcgcatgggcgtggctttgtcaggccaccggaagcgc
atcctgctgagcctgcaaaagctcttcccttcagaacgagggattagtggagaggaagag
gacgaggggcataagcctattccaaaagaaaggacgaaattccgcacttttgcagggact
gactcgggggtgaactcggatcagaaacagaaccttcccactaataattccgtgactcac
aagaaaggtcctcccccaatcccacctcgggcaactcagaactgtcctccggtaccattc
ttgactgtttctgttaccgcagctgtgaccgctgaggacgtgtctgtgactcctagcgat
ctcgcttctgtacctttgaccaaggtgactcagccaagacctgtgcccactccagttcct
gttccagttcggccccagccacgaaacttgcctcttgctccgaggcggcaaactggagat
cggaaaccatcacccgtctcaccatcagccgtctcaccattacatgtgtctccctcctgc
tcctccgcctcaccagcagaacagttccacctgtatgagcagtgttcttccccaggccat
gctgaattgggtgttcctcctctccctccaaagtcatatgctgtagtgacccccagagaa
cctaaagtcaccccacctgccaggcccccccggagaccccccatacccccccgcaacacc
atggcaaccaccaataaaaccacaccgctccccaggagcccaacagcgctaagctcgtct
ccagcagatgatctctgtggtctggacgtcacagcccaaataaaaccttgtatagaaact
tctcagctaggggccgtgttggcgccctgtcggagacggttggactctacaggcagttca
gacagctatgaggagctcaacatggcaaaatgtgcagacggtgatcctatagaaatgtca
gataagaacatgctccagccgcttccccgtgtccgcaagtctcggcacagcagcctgtac
agcgacgatgagctcctggatgaggacgacgactccgtggcggaaaagcggcactcatgg
attgaggattacagccaaatctctagcagccagaacagcatctatctgcccaccacagct
ctgccccccaaggatgactccaccccacaactcacccccgtcattaagatgggctggctc
gataagaaccctccacaggggtccctgatctatcagcggcgttgggtcaaactggacgct
gattacctgcgatactttgacaatgacaaggatgtttattcaaagcggctcataccaaca
tcctccatcacaacagtgaccagtgtgggagaccagaagtttgaggtggtcactcataat
cgcaccttcctgtttcgggctgagagtgatttggagaggaatgattgggtgatggtgcta
caggacatcatcagttcatctcgcctgaagccgagctctgagttgacccttaacctctat
gcgaccgcagagatgaaaggttacctggaggttcggggcctgcgctctaaactctacacc
acagtgtgtggagacaaagtgttcctttacaaaaatgctgaggactataagttgggtatc
gggatcacagctatagatatgaatgtggggaatgtgaaagacatggacagaagagctttt
gacctgaccacaccttaccgcgtattcagttttgtggcagaaactgatcagctcaaggac
cagtggatggaggcaatgaggaactccattgctgaagctctgtctaactatgaggtagca
gagaagatatgggcggaaccagccaatcaggattgtgctgactgttgcgccaccaaacca
gagtgggcagctattaatctgggggttgtcttctgcaagcgctgtgcaggagaacaccgc
agtcttggtccgagcatatcaaaagtacgaagcctcaaaatggacagaaaggtgtggact
gatgatttaatccagctgtttctggaggtgggcaacgagagagccaatcaattttgggca
gctaacattccacccagcgaggccttgactccgctcagcagcagtgacgagcgccggcgt
tttatcacggctaaataccgcgagggcaaataccgacgctaccacccactgttcggcaac
caaaaagagcttgacaatgcgttgtgtattaacgtgcagtctaatgatgtgtgtgagact
ctcgccctcatcttttgcggtgccgatgtgaactgtgacacgggtatcccagaattcccc
actcctgctgccttggccctgcactacggtcagaagctgcaggtggagttcctgactcag
aaccgcaacattgagattccgaggtcagaggtcaaactggccatgcacacagagcactac
atggccccgccttccatcacacacaacggcttcctttttaaaatcgcctctatggctcgt
ccaatcacagagaggaagaataaagaagagttcagtcggaggtggtgtgtcctgaatgat
ggacattttaattattacgaaagtgataagaatgcaacacccaatggaggactgaaaatg
aaagagatcgtctgtctggctgtcaatcctcctgagacgcacgggtatgatcactcgttt
gagatttactcagatgcagagcgtctctacctgtttgggacggacagtcctgactccatg
aaggaatgggtcaagtccatcgccaagtcgttcatcccagcatgtgccgaagacctgctg
cagaaggatttcgagcggatcgggcgtctgcgctataaagaccctctaaacctggagagc
tggaggccgggctggttctgtctcgaggcgtccacgctgcatgtgtgtttggaggacagt
cagagccgtgagagcatccagctgcagaaacttctggaactctcgagggataatgaagtt
ctggtgcttgtggagcggggcaggactctgtacattgagggagagaggaagttggatttt
catggctgggcatcggccatccagagggctgctgggagttccggagataacctgagtcag
cagcagctcactgaggccgatatcccactcatagtggagcgttgtatacattacgtcacg
cagtacggcctcgcatcagaaggtatttaccgtaagagtggcgtgaacagtaagatcgcc
tccctgctggacaccttcaggaacgacgctcgctctgtgtggcttaaagagggagagcat
caagtggacgacgtgtccaacgtcctcaaaaggttcttcagggacatcgaggagggactg
ttcggtccacaatctcacaactggctcagcactacggctctctcagatgaaagcaggaag
atttctcagtatcggcttctttttgaaaatctgcctcgagttaacaaagccacactacgc
acgctggtcaatcacttatactgtgtgcagcggttttcagaactgaaccatatgaacctc
cataacctcgcaatagtttttgggccaacacttttccaaacagacggtcaggactacaac
gcagggcgcgtggtggaggatctcatacagcactacatcaccattttcagcgtcaatgaa
cagcagttaaagaaacagcttgatgagatcaccttcatcattaagttacgagaaaacctc
aactctataccaggaccggccagtggggattttatctgcacagtgtatctggaggagaag
aaggagatggctgagcagcatgtgaagatcccagccacgatgacggcagctgaactggcc
ttcgagatcctggaccgcaggaagatcagcatcaaggagaaggactactggtgctgcttt
gagatcaatgagaaagaggagactgaacgtcctctgcactatcaggagaaagtgttgccg
atcctgcacagtttagggacagacagtcacctgcttatcaaaaagcactattcaatggag
gccatgctcatctacctggccagtaaagtggatgtgactaaacatggcatgctgaagttt
agagaggagcgcagtctgctgggtctgagtacaggaagcttcaatgatagatacttcatg
ctgaaccagacctcactacgactctacaaagatgtccggaatctgcacaaggatcagttg
ctgctgtgtagtaatcgggcagagaaggagtggcctgtcaagtgtctaaaagtctatnca
gggataaagaagaaactccgcccaccaacgtgttggggtctgactgtggtgtatgaaagt
gagaagcctgagaagcaggacaaacagcagtggtatctgtgctgtgacactcagacagag
atgagggagtggctcgctacatttctcagtatacagcatgcaggtgtcctgtggccggcc
gaatggttgaagtcgcgtcctgtcactcgttcctctcctccgctggactctcgtctcggt
agcgtgtcgctaattcctctgcgtggtactgagagtgagatgaggaacagcgtggctgct
ttctccgccgatcccttggctctcttaagaaacctatga
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