Neoarius graeffei (lesser salmon catfish): 132901035
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Entry
132901035 CDS
T10798
Name
(RefSeq) interferon alpha-3-like
KO
K05414
interferon alpha
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04060
Cytokine-cytokine receptor interaction
ngra04217
Necroptosis
ngra04620
Toll-like receptor signaling pathway
ngra04621
NOD-like receptor signaling pathway
ngra04622
RIG-I-like receptor signaling pathway
ngra04623
Cytosolic DNA-sensing pathway
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
132901035
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
132901035
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
132901035
04621 NOD-like receptor signaling pathway
132901035
04622 RIG-I-like receptor signaling pathway
132901035
04623 Cytosolic DNA-sensing pathway
132901035
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132901035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ngra04052
]
132901035
Cytokines and neuropeptides [BR:
ngra04052
]
Cytokines
Interferons
132901035
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DHR-2_Lobe_C
Exo84_C
Pex19
FUT8_N_cat
DUF4164
Motif
Other DBs
NCBI-GeneID:
132901035
NCBI-ProteinID:
XP_060799427
LinkDB
All DBs
Position
16:7728711..7733449
Genome browser
AA seq
250 aa
AA seq
DB search
MLDVGALNAFTIFTAQHPDYMNGVPNARRLFIKELAKELIMPHMNRRMETSVHLRRNVTE
AMATCVLNMELVNFVLLLVLVLSEAAALPSCIWTHTRLKTLNKQSNELLKNMGGHMPLEC
LERNNNSFPKGVFVKAQDEDLVLVALETLKGVEKIFKNNKASVTWDREKVSRFTNLINRQ
VEKLQECVGKKVQRAMETPAESSTHTLRSYFQKLEERLKEKEFSSCGWEMVRTELQDGLK
EFQTFLHSRN
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgttggtgctctgaacgccttcaccatctttactgcacaacaccctgactat
atgaatggtgtgccaaatgcacggcggcttttcatcaaggagttggccaaagagctcatc
atgcctcacatgaacaggcgcatggagacctctgttcatctccggaggaatgttactgag
gccatggcaacatgtgtgctgaatatggagctggtgaactttgtgctgctgctcgtgttg
gtgttgagtgaagctgcagctctgccatcctgcatctggacacacaccagactcaaaaca
ctgaacaagcagagcaatgagctgctgaagaacatgggtggtcacatgccactggagtgc
ttggaaagaaataataactcctttccaaagggtgtgttcgttaaagctcaggatgaagac
ctggtcttggtggctcttgagactctgaaaggagttgagaaaatcttcaaaaacaacaaa
gcgtcagtgacgtgggacagagagaaagtgtctcgcttcaccaatctgataaacagacaa
gtggagaagctgcaggaatgtgtcgggaaaaaggtccagagagcgatggagacacctgcg
gagagcagcactcatacactgaggtcctattttcagaagctggaggaacgactgaaagag
aaggagttcagctcgtgtggatgggagatggtgagaactgagcttcaggatggtctcaag
gagtttcagacttttctacacagcaggaactga
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